Protein Alignment tHMG1 and HMGB5

DIOPT Version :10

• Sequence 1: NP_651055.1
• Gene: tHMG1 / 42650
• FlyBaseID: FBgn0038978
• Length: 126
• Species: Drosophila melanogaster
• Sequence 2: NP_195282.1
• Gene: HMGB5 / 829709
• AraportID: AT4G35570
• Length: 125
• Species: Arabidopsis thaliana
• Alignment Length: 72
• Identity: 22/72 - (30%)
• Similarity: 38/72 - (52%)
• Gaps: 2/72 - (2%)

  Fly     7 RPKKPMSAFMLWMNSTGRKHIKAEHPD-FSVQEVSVKGGEMWRAMADEDKIVWQESATTAMAEYK 70
            |||||.|.|.::::.. ||.....:|| .||..|....|:.|:.|.:|::..:...:.:...||.
plant    33 RPKKPPSPFFVFLDDF-RKEFNLANPDNKSVGNVGRAAGKKWKTMTEEERAPFVAKSQSKKTEYA 96

  Fly    71 EKLKQWN 77
            ..::|:|
plant    97 VTMQQYN 103

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG1	NP_651055.1	HMG_box	8..76	CDD:459837	19/68 (28%)
HMGB5	NP_195282.1	HMG-box_AtHMGB1-like	35..95	CDD:438821	16/60 (27%)