Protein Alignment tHMG1 and 3xHMG-box2

DIOPT Version :9

• Sequence 1: NP_651055.1
• Gene: tHMG1 / 42650
• FlyBaseID: FBgn0038978
• Length: 126
• Species: Drosophila melanogaster
• Sequence 2: NP_194111.1
• Gene: 3xHMG-box2 / 828480
• AraportID: AT4G23800
• Length: 456
• Species: Arabidopsis thaliana
• Alignment Length: 71
• Identity: 20/71 - (28%)
• Similarity: 39/71 - (54%)
• Gaps: 1/71 - (1%)

  Fly     7 RPKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATTAMAEYKE 71
            :||||.|::.|: :...||.:..|.|..:...|:......|:.:::|:|.|:...|...|..||:
plant   378 KPKKPASSYFLF-SKDERKKLTEERPGTNNATVTALISLKWKELSEEEKQVYNGKAAKLMEAYKK 441

  Fly    72 KLKQWN 77
            :::.:|
plant   442 EVEAYN 447

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG1	NP_651055.1	HMGB-UBF_HMG-box	8..74	CDD:238686	19/65 (29%)
		Herpes_U55	<55..>116	CDD:253772	7/23 (30%)
3xHMG-box2	NP_194111.1	PTZ00121	<2..454	CDD:173412	20/71 (28%)
		HMGB-UBF_HMG-box	139..203	CDD:238686
		HMG-box	255..320	CDD:381793
		HMGB-UBF_HMG-box	379..444	CDD:238686	19/65 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820