Protein Alignment tHMG1 and HMGB1

DIOPT Version :9

• Sequence 1: NP_651055.1
• Gene: tHMG1 / 42650
• FlyBaseID: FBgn0038978
• Length: 126
• Species: Drosophila melanogaster
• Sequence 2: NP_974413.1
• Gene: HMGB1 / 824351
• AraportID: AT3G51880
• Length: 185
• Species: Arabidopsis thaliana
• Alignment Length: 72
• Identity: 22/72 - (30%)
• Similarity: 42/72 - (58%)
• Gaps: 2/72 - (2%)

  Fly     7 RPKKPMSAFMLWMNSTGRKHIKAEHPDF-SVQEVSVKGGEMWRAMADEDKIVWQESATTAMAEYK 70
            :||:..|||.:::... |...|.|:|:. :|..|...||:.|::|:..:|..::|.|....|||:
plant    52 KPKRAPSAFFVFLEDF-RVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYE 115

  Fly    71 EKLKQWN 77
            :::..:|
plant   116 KQMDAYN 122

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG1	NP_651055.1	HMGB-UBF_HMG-box	8..74	CDD:238686	21/66 (32%)
		Herpes_U55	<55..>116	CDD:253772	7/23 (30%)
HMGB1	NP_974413.1	HMG_box	53..121	CDD:278906	21/68 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	57	1.000	Domainoid score	I3986
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm3425
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	4.820