Protein Alignment tHMG1 and HMGB4

DIOPT Version :9

• Sequence 1: NP_651055.1
• Gene: tHMG1 / 42650
• FlyBaseID: FBgn0038978
• Length: 126
• Species: Drosophila melanogaster
• Sequence 2: NP_001031364.2
• Gene: HMGB4 / 816263
• AraportID: AT2G17560
• Length: 138
• Species: Arabidopsis thaliana
• Alignment Length: 72
• Identity: 25/72 - (34%)
• Similarity: 39/72 - (54%)
• Gaps: 2/72 - (2%)

  Fly     7 RPKKPMSAFMLWMNSTGRKHIKAEHP-DFSVQEVSVKGGEMWRAMADEDKIVWQESATTAMAEYK 70
            :||:|.|||.:::... ||.....:| :.||..|....|..|:||.||||..:...|.:...||.
plant    34 QPKRPPSAFFVFLEDF-RKEFNLANPNNKSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYI 97

  Fly    71 EKLKQWN 77
            :.::|:|
plant    98 KNVQQYN 104

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG1	NP_651055.1	HMGB-UBF_HMG-box	8..74	CDD:238686	23/66 (35%)
		Herpes_U55	<55..>116	CDD:253772	6/23 (26%)
HMGB4	NP_001031364.2	HMG_box	35..103	CDD:278906	23/68 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	57	1.000	Domainoid score	I3986
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm3425
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	4.820