Protein Alignment tHMG1 and Hmg20a

DIOPT Version :9

• Sequence 1: NP_651055.1
• Gene: tHMG1 / 42650
• FlyBaseID: FBgn0038978
• Length: 126
• Species: Drosophila melanogaster
• Sequence 2: NP_080088.1
• Gene: Hmg20a / 66867
• MGIID: 1914117
• Length: 346
• Species: Mus musculus
• Alignment Length: 69
• Identity: 17/69 - (24%)
• Similarity: 37/69 - (53%)
• Gaps: 1/69 - (1%)

  Fly     8 PKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATTAMAEYKEK 72
            ||.|::.::.:||.. |:.::|:.|:....|::...|..|..:..|:|..:.:.|......|.::
Mouse   102 PKSPLTGYVRFMNER-REQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKE 165

  Fly    73 LKQW 76
            |:|:
Mouse   166 LEQY 169

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG1	NP_651055.1	HMGB-UBF_HMG-box	8..74	CDD:238686	15/65 (23%)
		Herpes_U55	<55..>116	CDD:253772	5/22 (23%)
Hmg20a	NP_080088.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..112		3/9 (33%)
		DUF5401	<76..312	CDD:375164	17/69 (25%)
		HMGB-UBF_HMG-box	102..167	CDD:238686	15/65 (23%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	178..210

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900