Protein Alignment tHMG1 and tfam

DIOPT Version :9

• Sequence 1: NP_651055.1
• Gene: tHMG1 / 42650
• FlyBaseID: FBgn0038978
• Length: 126
• Species: Drosophila melanogaster
• Sequence 2: NP_001070857.1
• Gene: tfam / 571106
• ZFINID: ZDB-GENE-061013-552
• Length: 277
• Species: Danio rerio
• Alignment Length: 84
• Identity: 23/84 - (27%)
• Similarity: 37/84 - (44%)
• Gaps: 18/84 - (21%)

  Fly     8 PKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKG-------GEMWRAMADEDKIVWQESATTA 65
            ||:|::|:|.:        :|...|..|.|..|:|.       .:.|:.:..|.|..:|.::..|
Zfish    47 PKRPLTAYMTF--------VKDMQPTVSKQNPSIKSVDVMRKIAQQWKMLTTEQKQPFQVASLEA 103

  Fly    66 MAEYK---EKLKQWNFPKE 81
            ..:||   ||.|....|.|
Zfish   104 KEQYKLALEKFKAQLTPAE 122

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG1	NP_651055.1	HMGB-UBF_HMG-box	8..74	CDD:238686	20/75 (27%)
		Herpes_U55	<55..>116	CDD:253772	10/30 (33%)
tfam	NP_001070857.1	HMG_box	47..114	CDD:278906	19/74 (26%)
		HMGB-UBF_HMG-box	152..213	CDD:238686

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.820