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Protein Alignment tHMG1 and hmgb3b
DIOPT Version :9
Sequence 1: | NP_651055.1 |
Gene: | tHMG1 / 42650 |
FlyBaseID: | FBgn0038978 |
Length: | 126 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001017769.1 |
Gene: | hmgb3b / 550466 |
ZFINID: | ZDB-GENE-050417-290 |
Length: | 198 |
Species: | Danio rerio |
Alignment Length: | 79 |
Identity: | 22/79 - (27%) |
Similarity: | 43/79 - (54%) |
Gaps: | 3/79 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 RPKKPMSAFMLWMNSTGRKHIKAEHPDFSV--QEVSVKGGEMWRAMADEDKIVWQESATTAMAEY 69
:||..|||:..::.:...:|.| ::|..:| .|.|.|..|.|:.|:.::|..:::.|....|.|
Zfish 8 KPKGKMSAYAYFVKTCREEHNK-KNPGVTVNFSEFSKKCSERWKTMSPKEKTKFEDLAKQDKARY 71
Fly 70 KEKLKQWNFPKEHR 83
.:::..:|..|:.|
Zfish 72 DQEMMHYNPGKKGR 85
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5648 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1641977at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.820 |
|
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