Protein Alignment tHMG1 and hmgb3

DIOPT Version :9

• Sequence 1: NP_651055.1
• Gene: tHMG1 / 42650
• FlyBaseID: FBgn0038978
• Length: 126
• Species: Drosophila melanogaster
• Sequence 2: NP_001004888.1
• Gene: hmgb3 / 448228
• XenbaseID: XB-GENE-1002014
• Length: 202
• Species: Xenopus tropicalis
• Alignment Length: 74
• Identity: 26/74 - (35%)
• Similarity: 38/74 - (51%)
• Gaps: 8/74 - (10%)

  Fly     8 PKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATTA------- 65
            ||:|.|.|.|:. |..|..||:.:|..|:.:|:.|.||||..:.|.:|..:...|...
 Frog    93 PKRPPSGFFLFC-SEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDGEKQPYNNKAAKLKEKYEKD 156

  Fly    66 MAEYKEKLK 74
            :|:||.|.|
 Frog   157 VADYKSKGK 165

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG1	NP_651055.1	HMGB-UBF_HMG-box	8..74	CDD:238686	25/72 (35%)
		Herpes_U55	<55..>116	CDD:253772	7/27 (26%)
hmgb3	NP_001004888.1	HMG-box	13..78	CDD:381793
		HMG_box	93..160	CDD:366139	22/67 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920