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Protein Alignment tHMG1 and ubtfl
DIOPT Version :10
| Sequence 1: | NP_651055.1 |
Gene: | tHMG1 / 42650 |
FlyBaseID: | FBgn0038978 |
Length: | 126 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_957297.2 |
Gene: | ubtfl / 393978 |
ZFINID: | ZDB-GENE-040426-1159 |
Length: | 719 |
Species: | Danio rerio |
| Alignment Length: | 69 |
Identity: | 16/69 - (23%) |
| Similarity: | 34/69 - (49%) |
Gaps: | 1/69 - (1%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 8 PKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATTAMAEYKEK 72
|:||.:...||.|...:.::|. ||:.|.:|:.......|..::|:.::.|...|......|::.
Zfish 198 PEKPKTPQQLWYNHEKKTYMKI-HPEVSQKELKEALRRQWSQLSDKKRLKWISKALELQKHYEDT 261
Fly 73 LKQW 76
::.:
Zfish 262 MRAY 265
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| tHMG1 | NP_651055.1 |
HMG_box |
8..76 |
CDD:459837 |
16/67 (24%) |
| ubtfl | NP_957297.2 |
None |
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