Protein Alignment tHMG1 and hmgb1a

DIOPT Version :9

• Sequence 1: NP_651055.1
• Gene: tHMG1 / 42650
• FlyBaseID: FBgn0038978
• Length: 126
• Species: Drosophila melanogaster
• Sequence 2: NP_955849.2
• Gene: hmgb1a / 321622
• ZFINID: ZDB-GENE-030131-341
• Length: 205
• Species: Danio rerio
• Alignment Length: 68
• Identity: 24/68 - (35%)
• Similarity: 41/68 - (60%)
• Gaps: 5/68 - (7%)

  Fly     8 PKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATTAMAEYKEK 72
            ||:|.|||.::. |..|..:|.|.|..|:.:|:.:.||||..::.|:|..:::.|    |:.|||
Zfish    94 PKRPPSAFFIFC-SEFRPKVKEETPGLSIGDVAKRLGEMWNKISSEEKQPYEKKA----AKLKEK 153

  Fly    73 LKQ 75
            .::
Zfish   154 YEK 156

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG1	NP_651055.1	HMGB-UBF_HMG-box	8..74	CDD:238686	24/65 (37%)
		Herpes_U55	<55..>116	CDD:253772	6/21 (29%)
hmgb1a	NP_955849.2	HMG-box	7..77	CDD:320749
		HMG_box	94..161	CDD:278906	24/68 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.920