Protein Alignment tHMG1 and cmb1

DIOPT Version :9

• Sequence 1: NP_651055.1
• Gene: tHMG1 / 42650
• FlyBaseID: FBgn0038978
• Length: 126
• Species: Drosophila melanogaster
• Sequence 2: NP_593693.1
• Gene: cmb1 / 2543595
• PomBaseID: SPAC4G9.11c
• Length: 223
• Species: Schizosaccharomyces pombe
• Alignment Length: 76
• Identity: 17/76 - (22%)
• Similarity: 36/76 - (47%)
• Gaps: 5/76 - (6%)

  Fly     8 PKKPMSAFMLWM-----NSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATTAMA 67
            ||||.|||:|:.     |...|:.:.......::.|.:....:.|:.:|::.|..:.:.:.....
pombe   147 PKKPSSAFILFYKELRNNPKLRQELGIPEAISTLVEETQNASKAWKELAEDKKKPFIDKSKALKE 211

  Fly    68 EYKEKLKQWNF 78
            :|.:.:|:..|
pombe   212 QYDKFMKEAGF 222

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG1	NP_651055.1	HMGB-UBF_HMG-box	8..74	CDD:238686	15/70 (21%)
		Herpes_U55	<55..>116	CDD:253772	4/24 (17%)
cmb1	NP_593693.1	NHP6B	1..220	CDD:227935	16/72 (22%)
		HMGB-UBF_HMG-box	147..218	CDD:238686	15/70 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900