Protein Alignment tHMG1 and B0238.11

DIOPT Version :9

• Sequence 1: NP_651055.1
• Gene: tHMG1 / 42650
• FlyBaseID: FBgn0038978
• Length: 126
• Species: Drosophila melanogaster
• Sequence 2: NP_504410.1
• Gene: B0238.11 / 178915
• WormBaseID: WBGene00015075
• Length: 317
• Species: Caenorhabditis elegans
• Alignment Length: 158
• Identity: 32/158 - (20%)
• Similarity: 50/158 - (31%)
• Gaps: 64/158 - (40%)

  Fly     2 SDCGARPKKPMSAFMLWMNSTGRKHIKAEH-----------PDFSVQEVSVKGGEMWRAMADEDK 55
            |:.|:.|||...:    ......|.:|||.           .||..::::....|..|   :||.
 Worm     8 SNAGSSPKKEKKS----ETFAALKSVKAEKRPAADSSDSEPEDFEEEQITHTEAEETR---NEDN 65

  Fly    56 --------------------IVWQESATTAMAEYKEKLKQWNFPKEHRFSDTQCICSSNTNQCPT 100
                                :|.::|.|:.:...:.|:.:|   .|.|..|         |....
 Worm    66 GQAIYEPDVMRPLIESFLEFLVQRQSETSTVHNMENKVAEW---AETRRDD---------NIDAG 118

  Fly   101 LFVYD--------------TMDDSMTPI 114
            |||.|              .|:||...|
 Worm   119 LFVLDFRKYLKSAVKFKNLQMNDSCAAI 146

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG1	NP_651055.1	HMGB-UBF_HMG-box	8..74	CDD:238686	17/96 (18%)
		Herpes_U55	<55..>116	CDD:253772	17/94 (18%)
B0238.11	NP_504410.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900