Protein Alignment tHMG1 and hmg-5

DIOPT Version :9

• Sequence 1: NP_651055.1
• Gene: tHMG1 / 42650
• FlyBaseID: FBgn0038978
• Length: 126
• Species: Drosophila melanogaster
• Sequence 2: NP_501245.1
• Gene: hmg-5 / 177543
• WormBaseID: WBGene00001975
• Length: 204
• Species: Caenorhabditis elegans
• Alignment Length: 70
• Identity: 17/70 - (24%)
• Similarity: 27/70 - (38%)
• Gaps: 6/70 - (8%)

  Fly     7 RPKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATTAMAEYKE 71
            ||..|.||:.|::..      |........:|...:....|:|..|..|..:.:.|.....||..
 Worm   131 RPSVPPSAYALFIKE------KLSGAGMESKEKMKEAVAQWKAFTDSQKKKYTDEAKKLKDEYHV 189

  Fly    72 KLKQW 76
            .|::|
 Worm   190 VLQKW 194

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG1	NP_651055.1	HMGB-UBF_HMG-box	8..74	CDD:238686	14/65 (22%)
		Herpes_U55	<55..>116	CDD:253772	6/22 (27%)
hmg-5	NP_501245.1	NHP6B	<37..187	CDD:227935	13/61 (21%)
		HMGB-UBF_HMG-box	132..192	CDD:238686	14/65 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900