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Protein Alignment tHMG1 and hmg-4
DIOPT Version :9
Sequence 1: | NP_651055.1 |
Gene: | tHMG1 / 42650 |
FlyBaseID: | FBgn0038978 |
Length: | 126 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_498633.1 |
Gene: | hmg-4 / 176052 |
WormBaseID: | WBGene00001974 |
Length: | 697 |
Species: | Caenorhabditis elegans |
Alignment Length: | 116 |
Identity: | 36/116 - (31%) |
Similarity: | 58/116 - (50%) |
Gaps: | 20/116 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 PKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATTAMAEYKEK 72
||:..||:|.|..:: |..:| |..| ||.:|:.|||..|:.|:.:||..|:|.|....:.|:::
Worm 556 PKRATSAYMQWFLAS-RNELK-EDGD-SVADVAKKGGAKWKTMSSDDKKKWEEKAEEDKSRYEKE 617
Fly 73 LKQW--NFPKEHRFSDTQCICSSNTNQCPTLFVYDTMDDSMTPICRKCLSK 121
:|:: |.|. |.:....||.|:: .|..|...|.:||
Worm 618 MKEYRKNGPP----SSSSKPSSSKTSK-----------KSSGPSSSKAISK 653
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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