Protein Alignment tHMG1 and LOC103690904

DIOPT Version :9

• Sequence 1: NP_651055.1
• Gene: tHMG1 / 42650
• FlyBaseID: FBgn0038978
• Length: 126
• Species: Drosophila melanogaster
• Sequence 2: XP_008771804.2
• Gene: LOC103690904 / 103690904
• RGDID: 9317736
• Length: 168
• Species: Rattus norvegicus
• Alignment Length: 65
• Identity: 23/65 - (35%)
• Similarity: 41/65 - (63%)
• Gaps: 1/65 - (1%)

  Fly     8 PKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATTAMAEYKEK 72
            |:||.|:|:|: :....:.||.:||:::|.:|:...|.||...::.|||.::|.|....|:|.|:
  Rat    93 PRKPPSSFLLF-SQDHFEEIKEQHPNWTVAQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEE 156

  Fly    73  72
              Rat   157  156

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG1	NP_651055.1	HMGB-UBF_HMG-box	8..74	CDD:238686	23/65 (35%)
		Herpes_U55	<55..>116	CDD:253772	7/18 (39%)
LOC103690904	XP_008771804.2	HMGB-UBF_HMG-box	9..76	CDD:238686
		HMGB-UBF_HMG-box	95..158	CDD:238686	22/63 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010