Protein Alignment tHMG1 and sox17b.2

DIOPT Version :9

• Sequence 1: NP_651055.1
• Gene: tHMG1 / 42650
• FlyBaseID: FBgn0038978
• Length: 126
• Species: Drosophila melanogaster
• Sequence 2: NP_001090837.1
• Gene: sox17b.2 / 100038235
• XenbaseID: XB-GENE-495335
• Length: 351
• Species: Xenopus tropicalis
• Alignment Length: 45
• Identity: 16/45 - (35%)
• Similarity: 28/45 - (62%)
• Gaps: 1/45 - (2%)

  Fly     6 ARPKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAM 50
            ||.::||:|||:|.... ||.:..::||....|:|...|:.|:::
 Frog    34 ARIRRPMNAFMVWAKDE-RKRLAQQNPDLHNAELSKMLGKSWKSL 77

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG1	NP_651055.1	HMGB-UBF_HMG-box	8..74	CDD:238686	14/43 (33%)
		Herpes_U55	<55..>116	CDD:253772
sox17b.2	NP_001090837.1	SOX-TCF_HMG-box	35..106	CDD:238684	15/44 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010