DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT1 and TCP1

DIOPT Version :9

Sequence 1:NP_524450.2 Gene:CCT1 / 42649 FlyBaseID:FBgn0003676 Length:557 Species:Drosophila melanogaster
Sequence 2:NP_010498.1 Gene:TCP1 / 851798 SGDID:S000002620 Length:559 Species:Saccharomyces cerevisiae


Alignment Length:538 Identity:341/538 - (63%)
Similarity:429/538 - (79%) Gaps:6/538 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LSIAGTRQSGASVRTQNVMAALSISNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEH 72
            |.:.|.:.||..:|.|||:|.::::|:||||||||||||||||||||.||||||||||.||:|:|
Yeast    13 LFLGGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQH 77

  Fly    73 PAAKVLVELAQLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSIISGYRIACKEACKYISE 137
            ||.|:||||||.||.|:|||||||||:|:||||.|:||||.|||||:||:|:|:|.:||.::|:|
Yeast    78 PAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINE 142

  Fly   138 HLTAPVDELGRDSLINIAKTSMSSKIIGADAEFFSAMVVDAAQSVKITDPRGQAAYSIKAINVLK 202
            .|:..||.||:::|||||||||||||||||::|||.|||||..:||..:.:|:..|.:||:||||
Yeast   143 VLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLK 207

  Fly   203 AHGKSARESVLIPGYALNCTIASQQMPKKIV--NAKIACLDFSLQKTKMKMGVQVLINDPDKLEA 265
            ||||||.||:|:||||||||:|||.|||:|.  |.||||||.:|||.:|.||||:.|:||::||.
Yeast   208 AHGKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQ 272

  Fly   266 IRARELDITKERINMILGTGVNVVLVSGGVDDLCMKYFVEAGAMAVRRVKKSDLKIIAKATGAAF 330
            ||.||..|..||:..|:..|..|||.:.|:||||:|.||||..|.|||.||.||:.||:||||..
Yeast   273 IRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRRCKKEDLRRIARATGATL 337

  Fly   331 ITSLTNMDGEESFDASMVGEAAEVAQERICDDELILIKGTKARAAASIILRGPNDFYCDEMERSV 395
            ::|::|::|||:|::|.:|...||.|.:..|||.||||||...:::||||||.||:..||||||:
Yeast   338 VSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKHSSSSIILRGANDYSLDEMERSL 402

  Fly   396 HDALCVVKRVLESKKVVAGGGCVEAALSIYLENFATSLASREQLAIAEFAKSLLVIPKTLSVNAA 460
            ||:|.||||.|||..||.|||||||||:|||:||||::.|||||||||||.:||:|||||:||||
Yeast   403 HDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAA 467

  Fly   461 KDATDLVAKLRSYHNSSQ-TKPE---RSDLKWTGLDLIEGVVRDNKKAGVLEPAMSKIKSLKFAT 521
            ||:::|||||||||.:|| .|||   |...:..|||||.|.:.|...||||||.:||:||||.|.
Yeast   468 KDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSAL 532

  Fly   522 EAAITILRIDDMIKLNPE 539
            ||.:.|||||.||.::||
Yeast   533 EACVAILRIDTMITVDPE 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT1NP_524450.2 TCP1_alpha 12..538 CDD:239451 338/531 (64%)
TCP1NP_010498.1 TCP1_alpha 17..549 CDD:239451 338/531 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341604
Domainoid 1 1.000 630 1.000 Domainoid score I17
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5656
Inparanoid 1 1.050 656 1.000 Inparanoid score I103
Isobase 1 0.950 - 0 Normalized mean entropy S29
OMA 1 1.010 - - QHG60896
OrthoFinder 1 1.000 - - FOG0005251
OrthoInspector 1 1.000 - - oto100106
orthoMCL 1 0.900 - - OOG6_101890
Panther 1 1.100 - - LDO PTHR11353
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1484
SonicParanoid 1 1.000 - - X3773
TreeFam 1 0.960 - -
1615.740

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