DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT1 and HSP60

DIOPT Version :9

Sequence 1:NP_524450.2 Gene:CCT1 / 42649 FlyBaseID:FBgn0003676 Length:557 Species:Drosophila melanogaster
Sequence 2:NP_013360.1 Gene:HSP60 / 850963 SGDID:S000004249 Length:572 Species:Saccharomyces cerevisiae


Alignment Length:615 Identity:128/615 - (20%)
Similarity:240/615 - (39%) Gaps:155/615 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GASVRTQNVMAALSISNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLL----EVEHPAAKV 77
            |...|...:....:::..|.::|||.|.:.::....|...:|.||.|:.:.:    :.|:..||:
Yeast    30 GVEGRASLLKGVETLAEAVAATLGPKGRNVLIEQPFGPPKITKDGVTVAKSIVLKDKFENMGAKL 94

  Fly    78 LVELAQLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSIISGYRIACKEACKYISEH---- 138
            |.|:|...:|..||||||..:|...:...:.:.|....:|..:..|.::|.::..:::|.:    
Yeast    95 LQEVASKTNEAAGDGTTSATVLGRAIFTESVKNVAAGCNPMDLRRGSQVAVEKVIEFLSANKKEI 159

  Fly   139 -----------------------LTAPVDELGRDSLINIAKTSMSSKIIGADAEFFSAMVVDAA- 179
                                   |.:.::::|::.:|.|.:    .:.:..:.|....|..|.. 
Yeast   160 TTSEEIAQVATISANGDSHVGKLLASAMEKVGKEGVITIRE----GRTLEDELEVTEGMRFDRGF 220

  Fly   180 -QSVKITDPRGQAAYSIKAINVLKAHGKSARESVLIPGYALNCTIASQQMPKKIV------NAKI 237
             ....||||:.......|.:.:|.....|:.:.:| |  ||..:..|:: |..|:      .|..
Yeast   221 ISPYFITDPKSSKVEFEKPLLLLSEKKISSIQDIL-P--ALEISNQSRR-PLLIIAEDVDGEALA 281

  Fly   238 ACLDFSLQKTKMKMGVQVLINDPDKLEAIRAREL-DITKERINMILGTGVNVVLVSGG---VDDL 298
            ||:   |.|.:.::          |:.|::|... |..|..|.       ::.:::||   .::|
Yeast   282 ACI---LNKLRGQV----------KVCAVKAPGFGDNRKNTIG-------DIAVLTGGTVFTEEL 326

  Fly   299 CMK----YFVEAGAMAVRRVKKSDLKI-------------IAKATGAAFITSLTNMDGEESFDAS 346
            .:|    .....|:.....|.|.|..|             |.:..|:..||:..:.:.|:     
Yeast   327 DLKPEQCTIENLGSCDSITVTKEDTVILNGSGPKEAIQERIEQIKGSIDITTTNSYEKEK----- 386

  Fly   347 MVGEAAEVAQERICDDELILIKGTKARAAASIILRGPNDFYCDEMERSVHDALCVVKRVLESKKV 411
                    .|||     |..:.|    ..|.|.:.|.::....|.:....|||...:..:| :.:
Yeast   387 --------LQER-----LAKLSG----GVAVIRVGGASEVEVGEKKDRYDDALNATRAAVE-EGI 433

  Fly   412 VAGGGCVEAALS-----IYLENFATSLASREQLAIAEFAKSLLVIPKTLSVNAAKDATDLVAKL- 470
            :.|||......|     :.::||      .::|.:....|::....|.:..||.::.:.::.|| 
Yeast   434 LPGGGTALVKASRVLDEVVVDNF------DQKLGVDIIRKAITRPAKQIIENAGEEGSVIIGKLI 492

  Fly   471 --------RSYHNSSQTKPERSDLKWTGLDLIEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITI 527
                    :.|..|   |.|.:|:..||:.....|||    :|:::  .|.:.||...||.||  
Yeast   493 DEYGDDFAKGYDAS---KSEYTDMLATGIIDPFKVVR----SGLVD--ASGVASLLATTEVAI-- 546

  Fly   528 LRIDDMIKLNPEDKSGKSYADACAAGELDG 557
              :|     .||..:      |..||.:.|
Yeast   547 --VD-----APEPPA------AAGAGGMPG 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT1NP_524450.2 TCP1_alpha 12..538 CDD:239451 122/594 (21%)
HSP60NP_013360.1 GroEL 25..548 CDD:239460 121/587 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.