DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT1 and CPN60B

DIOPT Version :10

Sequence 1:NP_524450.2 Gene:CCT1 / 42649 FlyBaseID:FBgn0003676 Length:557 Species:Drosophila melanogaster
Sequence 2:NP_175945.1 Gene:CPN60B / 841996 AraportID:AT1G55490 Length:600 Species:Arabidopsis thaliana


Alignment Length:588 Identity:131/588 - (22%)
Similarity:240/588 - (40%) Gaps:106/588 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 QSGASVRTQNVMAALS-ISNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHP----A 74
            :.|.::|  .:.|.:: ::::|..:|||.|.:.:|....|...:.|||.|:.|.:|:|.|    .
plant    63 KDGTTIR--RLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIG 125

  Fly    75 AKVLVELAQLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSIISGYRIACKEACKYISEHL 139
            ||::.:.|...::..|||||:.|:||...:....::|....:|..|..|           |.:..
plant   126 AKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRG-----------IEKTA 179

  Fly   140 TAPVDELGRDSLINIAKTSMSSKIIGADAEFFSAMVVDAAQSVKITDPRGQAAYSI--KAINVLK 202
            .|.|.||.:          ||.::  .|:|......|.|..:.:|.:...:|...:  |.:..|:
plant   180 KALVTELKK----------MSKEV--EDSELADVAAVSAGNNDEIGNMIAEAMSKVGRKGVVTLE 232

  Fly   203 AHGKSARESVLI-------PGYALNCTIA-SQQMPKKIVNAKIACLDFSLQKTKMKMGVQVLIND 259
             .||||..::.:       .||.....:. |::|..:..|.|:..:|..:...:..:||   :.|
plant   233 -EGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEFDNCKLLLVDKKITNARDLVGV---LED 293

  Fly   260 PDKLEAIRAR------ELDITKER-----INMILGTGVNVVLVSGGVDDLCMKYF----VEAGAM 309
                 |||..      ..||.:|.     :|.:.||.....|.:.|..:...:|.    :..||.
plant   294 -----AIRGGYPILIIAEDIEQEALATLVVNKLRGTLKIAALRAPGFGERKSQYLDDIAILTGAT 353

  Fly   310 AVRR-----VKKSDLKIIAKATGAAFITSLTNMDGEESF-DA---------SMVGEAAEVAQERI 359
            .:|.     :.|:..:::..|:........:.:.|:.|. ||         :::.:|.:..::..
plant   354 VIREEVGLSLDKAGKEVLGNASKVVLTKETSTIVGDGSTQDAVKKRVTQIKNLIEQAEQDYEKEK 418

  Fly   360 CDDELILIKGTKARAAASIILRGPNDFYCDEMERSVHDALCVVKRVLESKKVVAGGGCVEAALSI 424
            .::.:..:.|    ..|.|.:....:....|.:..|.|||...|..:| :.:|.||||....|:.
plant   419 LNERIAKLSG----GVAVIQVGAQTETELKEKKLRVEDALNATKAAVE-EGIVVGGGCTLLRLAS 478

  Fly   425 YLENFATSLASREQLAIAEFAKSLLVIP-KTLSVNAAKDATDLVAKLRSYHNSSQTKPERSDLKW 488
            .::....:|.:.|:...|:..|..|..| |.::.||..:.:.:..|:.|..|          :|:
plant   479 KVDAIKATLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDN----------VKF 533

  Fly   489 TGLDLIEGVVRDNKKAGVLEPAMSKIKSLKFATEAAITILRIDDMIKL----------NPEDKSG 543
             |.:...|...|...||:::|.......|:.|...|.|.|..|.::..          ||.|.||
plant   534 -GYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPVGNPMDNSG 597

  Fly   544 KSY 546
            ..|
plant   598 YGY 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT1NP_524450.2 TCP1_alpha 12..538 CDD:239451 125/578 (22%)
CPN60BNP_175945.1 PLN03167 1..600 CDD:215611 130/586 (22%)

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