DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT1 and Cpn60beta2

DIOPT Version :10

Sequence 1:NP_524450.2 Gene:CCT1 / 42649 FlyBaseID:FBgn0003676 Length:557 Species:Drosophila melanogaster
Sequence 2:NP_187956.1 Gene:Cpn60beta2 / 820549 AraportID:AT3G13470 Length:596 Species:Arabidopsis thaliana


Alignment Length:576 Identity:128/576 - (22%)
Similarity:225/576 - (39%) Gaps:113/576 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 ISNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHP----AAKVLVELAQLQDEEVGD 91
            ::::|..:|||.|.:.:|....|...:.|||.|:.|.:|:|.|    .||::.:.|...::..||
plant    74 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGD 138

  Fly    92 GTTSVVILAAELLKNADELVKQKIHPTSIISGYRIACKEACKYISEHLTAPVDELGRDSLINIAK 156
            |||:.|:||...:....::|....:|..|..|.....|                    :|:|..|
plant   139 GTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAK--------------------ALVNELK 183

  Fly   157 TSMSSKIIGADAEFFSAMVVDAAQSVKITDPRGQAAYSI--KAINVLKAHGKSARESVLI----- 214
            . ||.::  .|:|......|.|..:.::.....:|...:  |.:..|: .||||..::.:     
plant   184 L-MSKEV--EDSELADVAAVSAGNNHEVGSMIAEAMSKVGRKGVVTLE-EGKSAENNLYVVEGMQ 244

  Fly   215 --PGYALNCTIA-SQQMPKKIVNAKIACLDFSLQKTKMKMGVQVLINDPDKLE-AIRAR------ 269
              .||.....:. |::|..:..|.|:..:|..:...:..:||         || |||..      
plant   245 FDRGYISPYFVTDSEKMSVEYDNCKLLLVDKKVTNARDLVGV---------LEDAIRGGYPILII 300

  Fly   270 ELDITKER-----INMILGTGVNVVLVSGGVDDLCMKYF----VEAGAMAVRR-----VKKSDLK 320
            ..||.:|.     :|.:.||.....|.:.|..:...:|.    :..||..:|.     :.|:..:
plant   301 AEDIEQEALATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKAGKE 365

  Fly   321 IIAKATGAAFITSLTNMDGEESFDASMVGEAAEVAQERIC-------------DDELILIKGTKA 372
            ::..|:.......:|.:.|:        |...|...:|:.             :.|.:..:..|.
plant   366 VLGNASKVVLTKEMTTIVGD--------GTTQEAVNKRVVQIRNLIEQAEQDYEKEKLNERIAKL 422

  Fly   373 RAAASIILRG-PNDFYCDEMERSVHDALCVVKRVLESKKVVAGGGCVEAALSIYLENFATSLASR 436
            ....::|..| ..:....|.:..|.|||...|..:| :.:|.||||....|:..::....:|.:.
plant   423 SGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVE-EGIVVGGGCTLLRLASKVDAIKDTLEND 486

  Fly   437 EQLAIAEFAKSLLVIP-KTLSVNAAKDATDLVAKLRSYHNSSQTKPERSDLKWTGLDLIEGVVRD 500
            |:...||..|..|..| |.::.||..:.:.:..|:.:..|          :|: |.:...|...|
plant   487 EEKVGAEIVKRALSYPLKLIAKNAGVNGSVVSEKVLANDN----------VKF-GYNAATGKYED 540

  Fly   501 NKKAGVLEPAMSKIKSLKFATEAAITILRIDDMI----------KLNPEDKSGKSY 546
            ...||:::|.......|:.|...|.|.|..|.::          ..||.|.||..|
plant   541 LMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIPEPEPVPAGNPMDNSGYGY 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT1NP_524450.2 TCP1_alpha 12..538 CDD:239451 122/566 (22%)
Cpn60beta2NP_187956.1 PLN03167 1..596 CDD:215611 127/574 (22%)

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