DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT1 and Hspd1

DIOPT Version :9

Sequence 1:NP_524450.2 Gene:CCT1 / 42649 FlyBaseID:FBgn0003676 Length:557 Species:Drosophila melanogaster
Sequence 2:NP_071565.2 Gene:Hspd1 / 63868 RGDID:621314 Length:573 Species:Rattus norvegicus


Alignment Length:617 Identity:124/617 - (20%)
Similarity:217/617 - (35%) Gaps:209/617 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GASVRTQNVMAALSISNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEV----EHPAAKV 77
            ||..|...:.....:::.|..::||.|...::....|...||.||.|:.:.:::    ::..||:
  Rat    33 GADARALMLQGVDLLADAVAVTMGPKGRTVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKL 97

  Fly    78 LVELAQLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSIISGYRIACKEA---CKYISEHL 139
            :.::|...:||.|||||:..:||..:.|...|.:.:..:|..|..|..:|....   .|..|:.:
  Rat    98 VQDVANNTNEEAGDGTTTATVLARSIAKEGFEKISKGANPVEIRRGVMLAVDAVIAELKKQSKPV 162

  Fly   140 TAP------------------------VDELGRDSLINIAKTSMSSKIIGADAEFFSAMVVDAA- 179
            |.|                        :.::||..:|    |....|.:..:.|....|..|.. 
  Rat   163 TTPEEIAQVATISANGDKDIGNIISDAMKKVGRKGVI----TVKDGKTLNDELEIIEGMKFDRGY 223

  Fly   180 -QSVKITDPRGQA-----AY-------------SIKAINVLKAHGKS----ARESVLIPGYALNC 221
             ....|...:||.     ||             .:.|:.:..||.|.    |.:   :.|.||: 
  Rat   224 ISPYFINTSKGQKCEFQDAYVLLSEKKISSVQSIVPALEIANAHRKPLVIIAED---VDGEALS- 284

  Fly   222 TIASQQMPKKIVNAKIACLDFSLQKTKMKMGVQVLINDPDKLEAIRARELDITKERINMILGTGV 286
                                 :|...::|:|:||:        |::|.             |.|.
  Rat   285 ---------------------TLVLNRLKVGLQVV--------AVKAP-------------GFGD 307

  Fly   287 NVVLVSGGVDDLCMKYFVEAGAMAVRRVKKSDLKIIAKATGAAFITSLTNMDGEESFDASM---- 347
            |                           :|:.||.:|.|||.|..       |||..:.::    
  Rat   308 N---------------------------RKNQLKDMAIATGGAVF-------GEEGLNLNLEDVQ 338

  Fly   348 ---VGEAAEVAQERICDDELILIKGTKARA----------------------------------- 374
               :|:..||.   :..|:.:|:||...:|                                   
  Rat   339 AHDLGKVGEVI---VTKDDAMLLKGKGDKAHIEKRIQEITEQLDITTSEYEKEKLNERLAKLSDG 400

  Fly   375 AASIILRGPNDFYCDEMERSVHDALCVVKRVLESKKVVAGGGCVEAALSIYLENFATSLASREQL 439
            .|.:.:.|.:|...:|.:..|.|||...:..:| :.:|.||||........|::...  |:.:|.
  Rat   401 VAVLKVGGTSDVEVNEKKDRVTDALNATRAAVE-EGIVLGGGCALLRCIPALDSLKP--ANEDQK 462

  Fly   440 AIAEFAKSLLVIP-KTLSVNAAKDATDLVAKLRSYHNSSQTKPERSDLKWTGLDLIEGVVRDNKK 503
            ...|..|..|.|| .|::.||..:.:.:|.|:  ..:||:          .|.|.:.|...:..:
  Rat   463 IGIEIIKRALKIPAMTIAKNAGVEGSLIVEKI--LQSSSE----------VGYDAMLGDFVNMVE 515

  Fly   504 AGVLEPA---------MSKIKSLKFATEAAIT 526
            .|:::|.         .:.:.||....||.:|
  Rat   516 KGIIDPTKVVRTALLDAAGVASLLTTAEAVVT 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT1NP_524450.2 TCP1_alpha 12..538 CDD:239451 124/617 (20%)
Hspd1NP_071565.2 GroEL 28..548 CDD:239460 124/617 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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