DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT1 and fab1

DIOPT Version :10

Sequence 1:NP_524450.2 Gene:CCT1 / 42649 FlyBaseID:FBgn0003676 Length:557 Species:Drosophila melanogaster
Sequence 2:NP_611269.1 Gene:fab1 / 37033 FlyBaseID:FBgn0028741 Length:1809 Species:Drosophila melanogaster


Alignment Length:396 Identity:76/396 - (19%)
Similarity:134/396 - (33%) Gaps:114/396 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LASPLSIAGTRQSGASVRTQNVMAALSISNIVKSSLGPVGLDKMLVDDIGDVTVT-----NDGAT 63
            ||..:.:.|.|.......|......:....|....|.|   :::...|...||.:     ||   
  Fly  1233 LAESIELWGPRLQEIEKLTAKQAHHIDSGTICTEELRP---EQVQTADSSKVTTSSLPKEND--- 1291

  Fly    64 ILRLLEVEHPAAKVLVELAQLQDEEVGDGTTSVVI---------LAAELLKNADELVKQKIHPTS 119
                 .:|.|:          :|.|.|...:..|:         ||:.:...:|:...:||....
  Fly  1292 -----PLECPS----------EDTETGASNSQTVLDKNFSIDQMLASTVNVYSDKKSIRKILTQL 1341

  Fly   120 IISGYRIACKEACKYISEHLTAPVDELGRDSLINIAKTSMSSKIIGADAEFFSAMVVDAAQSVKI 184
            :.||.::...::.....:|||.|:..:.    |::.:|.:||.|                     
  Fly  1342 LPSGNQVNPLQSPFPAQDHLTLPLGSIP----IHVRETDLSSVI--------------------- 1381

  Fly   185 TDPRGQAAYSIKAINVLKAHGKSARESVLIPGYALNCTIASQQMPKKIVNAKIACLDF----SLQ 245
                   |||:.:::..||..::...|        |...:|.|:.:||..|: :..|.    ||.
  Fly  1382 -------AYSLTSMDYQKAIDEAEANS--------NAAHSSPQLKRKIPLAE-SVSDAEDSPSLS 1430

  Fly   246 KTKMKMGVQVLINDPDKLEAIRARELDITKERINMILGTGVNVVLVSGGVDDLCMKYFV-EAGAM 309
            :|..........:.|....|....| :.:||||.......:.:..........|..||. |..||
  Fly  1431 RTSSNTSAAPNASVPSPATAASESE-EKSKERIKQPPSPHITLAFQDHSCQFQCKIYFAREFDAM 1494

  Fly   310 -------------AVRRVKKS----DLKIIAKATGAAFITSLTNMDGEESFDASMVGEAAEVAQE 357
                         ..||::||    :|:|....||:               :..:|.:.::|...
  Fly  1495 RSKSLKPPKLDKSLYRRLEKSKMREELRISQSRTGS---------------EMELVRKPSDVGAP 1544

  Fly   358 RICDDE 363
            |..:|:
  Fly  1545 RTTEDD 1550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT1NP_524450.2 TCP1_alpha 12..538 CDD:239451 74/388 (19%)
fab1NP_611269.1 FYVE_PIKfyve_Fab1 182..243 CDD:277264
DEP 329..397 CDD:214489
Fab1_TCP 464..717 CDD:239450
PIPKc_PIKfyve 1479..1796 CDD:340437 18/87 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.