DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT1 and tcp1

DIOPT Version :10

Sequence 1:NP_524450.2 Gene:CCT1 / 42649 FlyBaseID:FBgn0003676 Length:557 Species:Drosophila melanogaster
Sequence 2:NP_571305.1 Gene:tcp1 / 30477 ZFINID:ZDB-GENE-990714-24 Length:556 Species:Danio rerio


Alignment Length:553 Identity:410/553 - (74%)
Similarity:477/553 - (86%) Gaps:1/553 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SPLSIAGTRQSGASVRTQNVMAALSISNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEV 70
            ||||:.|.|.:|.|||:||||||.||:||||||||||||||||||||||||:||||||||:||||
Zfish     4 SPLSVLGQRTTGESVRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEV 68

  Fly    71 EHPAAKVLVELAQLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSIISGYRIACKEACKYI 135
            ||||||||.|||:|||:|||||||||||:||||||:|||||||||||||||||||:|||||.:||
Zfish    69 EHPAAKVLCELAELQDKEVGDGTTSVVIIAAELLKSADELVKQKIHPTSIISGYRLACKEAVRYI 133

  Fly   136 SEHLTAPVDELGRDSLINIAKTSMSSKIIGADAEFFSAMVVDAAQSVKITDPRGQAAYSIKAINV 200
            :|:||...|:|||:.|:|.|||||||||||.|||||:.||||||.:||..|.:|.|.|.|.::||
Zfish   134 NENLTIGTDDLGRECLLNAAKTSMSSKIIGVDAEFFANMVVDAAVAVKFVDGKGVARYPINSVNV 198

  Fly   201 LKAHGKSARESVLIPGYALNCTIASQQMPKKIVNAKIACLDFSLQKTKMKMGVQVLINDPDKLEA 265
            |||||:|.:||.|:.|||||||:.||.|.|::.|||||||||||||||||:||||:||||:||:.
Zfish   199 LKAHGRSQKESFLVNGYALNCTVGSQGMVKRVANAKIACLDFSLQKTKMKLGVQVVINDPEKLDQ 263

  Fly   266 IRARELDITKERINMILGTGVNVVLVSGGVDDLCMKYFVEAGAMAVRRVKKSDLKIIAKATGAAF 330
            ||.||.||||||:..||.:|.||||.:||:||:|:||||:.||||||||.|.|||.|||||||..
Zfish   264 IRQRESDITKERVQKILASGANVVLTTGGIDDMCLKYFVDVGAMAVRRVLKKDLKRIAKATGATV 328

  Fly   331 ITSLTNMDGEESFDASMVGEAAEVAQERICDDELILIKGTKARAAASIILRGPNDFYCDEMERSV 395
            .:||:|::|||:|:.||:|:|.||.|||:|||||||||.||||.:|||||||.|||.|||||||:
Zfish   329 CSSLSNLEGEETFEPSMLGQAEEVVQERVCDDELILIKNTKARTSASIILRGANDFMCDEMERSL 393

  Fly   396 HDALCVVKRVLESKKVVAGGGCVEAALSIYLENFATSLASREQLAIAEFAKSLLVIPKTLSVNAA 460
            ||||||||||||||.||.|||.|||||||||||:|||:.|||||||||||:|||||||||:||||
Zfish   394 HDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPKTLAVNAA 458

  Fly   461 KDATDLVAKLRSYHNSSQTKPERSDLKWTGLDLIEGVVRDNKKAGVLEPAMSKIKSLKFATEAAI 525
            :|:||||||||::||.:|..|:|.:|||.||||:.|..||||:|||.||.|.|.|||||||||||
Zfish   459 QDSTDLVAKLRAFHNEAQVNPDRKNLKWIGLDLVNGKPRDNKQAGVYEPTMVKTKSLKFATEAAI 523

  Fly   526 TILRIDDMIKLNPEDK-SGKSYADACAAGELDG 557
            |||||||:|||.|:.| .|.||.||..:|.|:|
Zfish   524 TILRIDDLIKLFPDQKEGGPSYQDAVQSGSLEG 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT1NP_524450.2 TCP1_alpha 12..538 CDD:239451 396/525 (75%)
tcp1NP_571305.1 TCP1_alpha 10..536 CDD:239451 396/525 (75%)

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