DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT1 and cct-1

DIOPT Version :10

Sequence 1:NP_524450.2 Gene:CCT1 / 42649 FlyBaseID:FBgn0003676 Length:557 Species:Drosophila melanogaster
Sequence 2:NP_495722.1 Gene:cct-1 / 174318 WormBaseID:WBGene00000377 Length:549 Species:Caenorhabditis elegans


Alignment Length:547 Identity:375/547 - (68%)
Similarity:455/547 - (83%) Gaps:4/547 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SPLSIAGTRQSGASVRTQNVMAALSISNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEV 70
            |.|::.|.|.:|..:|:|||.||::|:|||||||||||||||||||:|||.|||||||||:.|||
 Worm     7 SILALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEV 71

  Fly    71 EHPAAKVLVELAQLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSIISGYRIACKEACKYI 135
            ||||.|||||||||||||||||||||||:||||||.||||||||:|||:||:|||:|||||.|||
 Worm    72 EHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYI 136

  Fly   136 SEHLTAPVDELGRDSLINIAKTSMSSKIIGADAEFFSAMVVDAAQSVKITDPRGQAAYSIKAINV 200
            ||:::...|.:||.|::|.|||||||||||.||:||..:|||||::|:: :..|:..|.|.|:||
 Worm   137 SENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRV-ENNGKVTYPINAVNV 200

  Fly   201 LKAHGKSARESVLIPGYALNCTIASQQMPKKIVNAKIACLDFSLQKTKMKMGVQVLINDPDKLEA 265
            |||||||||||||:.|||||||:|||.||.::.|||||||||||.|.||.:|:.|::.||.||||
 Worm   201 LKAHGKSARESVLVKGYALNCTVASQAMPLRVQNAKIACLDFSLMKAKMHLGISVVVEDPAKLEA 265

  Fly   266 IRARELDITKERINMILGTGVNVVLVSGGVDDLCMKYFVEAGAMAVRRVKKSDLKIIAKATGAAF 330
            ||..|.||||.||:.||..|.||||.:||:||||:|.|||:|||||||.||||||.|||||||..
 Worm   266 IRREEFDITKRRIDKILKAGANVVLTTGGIDDLCLKQFVESGAMAVRRCKKSDLKRIAKATGATL 330

  Fly   331 ITSLTNMDGEESFDASMVGEAAEVAQERICDDELILIKGTKARAAASIILRGPNDFYCDEMERSV 395
            ..||..::|:|:||||::|.|.|:.||||.|||||||||.|:|.|:||||||.||...|||||||
 Worm   331 TVSLATLEGDEAFDASLLGHADEIVQERISDDELILIKGPKSRTASSIILRGANDVMLDEMERSV 395

  Fly   396 HDALCVVKRVLESKKVVAGGGCVEAALSIYLENFATSLASREQLAIAEFAKSLLVIPKTLSVNAA 460
            ||:||||:|||||||:|||||.||.:||::||.:|.:|:||||||:||||.:||:|||.|:.|||
 Worm   396 HDSLCVVRRVLESKKLVAGGGAVETSLSLFLETYAQTLSSREQLAVAEFASALLIIPKVLASNAA 460

  Fly   461 KDATDLVAKLRSYHNSSQTKPERSDLKWTGLDLIEGVVRDNKKAGVLEPAMSKIKSLKFATEAAI 525
            :|:||||.|||:||:.:|..|:...|||.||||.||.:||||:||:||||:||:|||||||||||
 Worm   461 RDSTDLVTKLRAYHSKAQLIPQLQHLKWAGLDLEEGTIRDNKEAGILEPALSKVKSLKFATEAAI 525

  Fly   526 TILRIDDMIKLNPEDKSGKSYADACAA 552
            |||||||:|||:.::..|   .|.|.|
 Worm   526 TILRIDDLIKLDKQEPLG---GDDCHA 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT1NP_524450.2 TCP1_alpha 12..538 CDD:239451 369/525 (70%)
cct-1NP_495722.1 TCP1_alpha 13..538 CDD:239451 369/525 (70%)

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