DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT1 and cct-3

DIOPT Version :9

Sequence 1:NP_524450.2 Gene:CCT1 / 42649 FlyBaseID:FBgn0003676 Length:557 Species:Drosophila melanogaster
Sequence 2:NP_494218.2 Gene:cct-3 / 173581 WormBaseID:WBGene00018782 Length:543 Species:Caenorhabditis elegans


Alignment Length:529 Identity:156/529 - (29%)
Similarity:281/529 - (53%) Gaps:16/529 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LSIAGTRQSGASVRTQNVMAALSISNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEH 72
            ||....|:||..|:..|:.|..:|::::::||||..:.|||:|.:|.:.:||||..|||.:.|:|
 Worm    12 LSQGTKRESGHQVQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITVKH 76

  Fly    73 PAAKVLVELAQLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSIISGYRIACKEACKYISE 137
            ||||.::|:|:.||||.|||||||:|||.|::.:|...::||.|||.||..||.|.::..::...
 Worm    77 PAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYRQALEDMIQWSEN 141

  Fly   138 HLTAPVDELGRDSLINIAKTSMSSKIIGADAEFFSAMVVDAAQSVKITDPRGQAAYSIKA-INVL 201
            ..:..||......:..:.|:.:.:|:|....:....:.:.|.::::: :..|.....||. ..:.
 Worm   142 KFSKTVDITDDAEIAKVVKSCLGTKMISKWMDLAVNISIQAVKTIRV-EKAGVREIDIKRYCRIE 205

  Fly   202 KAHGKSARESVLIPGYALNCTIASQQMPKKIVNAKIACLDFSLQKTKMKMGVQVLINDPDKLEAI 266
            |..|....:|.::.|..:|..|...:|.::|.|.:|..||.:|:..|.:....:.|...:.:.||
 Worm   206 KIPGGRIEDSQVVKGIVVNKDILHAKMRRRIENPRIVLLDCNLEYKKGESQTSLEIMREEDISAI 270

  Fly   267 RARELDITKERINMILGTGVNVVLVSGGVDDLCMKYFVEAGAMAVRRVKKSDLKIIAKATGAAFI 331
            ..:|....:::.:.|:....::|....|:.||...:.::||...:||:||:|...:|:..||..:
 Worm   271 LEQEEQAIRKQCDEIIKLKPDLVFTEKGISDLAQHFLLKAGITCLRRLKKTDNNRLARVCGARVV 335

  Fly   332 TSLTNMDGEESFDASMVGEAAEVAQERICDDELILIKGTKARAAASIILRGPNDFYCDEMERSVH 396
            ...:::..|:....:.:.|..::|      ||.......:...|.:::||||:....:|:||::.
 Worm   336 HDTSDLRDEDVGTKAQLFEVVKIA------DEYYTYVTAETTTACTVVLRGPSKDVINEVERNLQ 394

  Fly   397 DALCVVKRVLESKKVVAGGGCVEAALSIYLENFATSLASREQLAIAEFAKSLLVIPKTLSVNAAK 461
            |:|.||:.::.:.|:|.|||.:|.|||..:|.....:...::........:|.|||:||..|...
 Worm   395 DSLHVVRNIMINPKLVPGGGALEMALSREIEQQGAKMDGVKKWPYKAIGLALEVIPRTLIQNCGG 459

  Fly   462 DATDLVAKLRSYHNSSQTKPERSDLKWT-GLDLIEGVVRDNKKAGVLEPAMSKIKSLKFATEAAI 525
            .....:.:||:.|..:..       .|| |:|...|.:.|..|..:.:|...:|:.||.|.|.::
 Worm   460 STIRKMTELRAIHAQNAE-------NWTFGVDGTSGDLVDMNKLEIWDPLAVRIQVLKTAIETSV 517

  Fly   526 TILRIDDMI 534
            .:|||||::
 Worm   518 MLLRIDDIV 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT1NP_524450.2 TCP1_alpha 12..538 CDD:239451 154/525 (29%)
cct-3NP_494218.2 chap_CCT_gamma 8..531 CDD:274085 156/529 (29%)
TCP1_gamma 8..528 CDD:239453 156/529 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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