DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT1 and Cct4

DIOPT Version :9

Sequence 1:NP_524450.2 Gene:CCT1 / 42649 FlyBaseID:FBgn0003676 Length:557 Species:Drosophila melanogaster
Sequence 2:NP_033967.1 Gene:Cct4 / 12464 MGIID:104689 Length:539 Species:Mus musculus


Alignment Length:529 Identity:170/529 - (32%)
Similarity:302/529 - (57%) Gaps:27/529 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RQSGASVRTQNVMAALSISNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAAKVL 78
            |...|.:|..|:.||.::::.:::||||.|:|||:.|..||||:||||||||:.::|.||||::|
Mouse    27 RDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARML 91

  Fly    79 VELAQLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSIISGYRIACKEACKYISEHLTAPV 143
            |||::.||.|.|||||||||:|..||.:..:|:::.||||.|...::.|.::..:.::: ::.||
Mouse    92 VELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTD-MSRPV 155

  Fly   144 DELGRDSLINIAKTSMSSKIIGADAEFFSAMVVDAAQSVKITDPRGQAAYSIKAINVLKAHGKSA 208
            ....|::|:|.|.||::||::...:...|.|.|:|.  :|:.||....:..::.|.::|..|.:.
Mouse   156 QLSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAV--MKVIDPATATSVDLRDIKIVKKLGGTI 218

  Fly   209 RESVLIPGYALNCTIASQQMPKKIVNAKIACLDFSLQKTKMKMGVQVLINDPDKLEAIRARELDI 273
            .:..|:.|..|...:|:..: .::..|||..:.|.|...|..|..|::::|..:::.:...|...
Mouse   219 DDCELVEGLVLTQKVANSGI-TRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREERAY 282

  Fly   274 TKERINMILGTGVNVVLVSGGV-----DDLCMKYFVEAGAMAVRRVKKSDLKIIAKATGAAFITS 333
            ....:..|..||.||:|:...:     .||.:.:..:...|.|:.|::.|::.|.|..|...:..
Mouse   283 ILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDVEREDIEFICKTIGTKPVAH 347

  Fly   334 LTNMDGEESFDASMVGEAAEVAQERICD--DELILIKG-TKARAAASIILRGPNDFYCDEMERSV 395
            :      :.|.|.|:| :||:|:|...:  .:|..|.| |......:|::||.|....:|.|||:
Mouse   348 I------DQFTADMLG-SAELAEEVSLNGSGKLFKITGCTSPGKTVTIVVRGSNKLVIEEAERSI 405

  Fly   396 HDALCVVKRVLESKKVVAGGGCVEAALSIYLENFATSLASREQLAIAEFAKSLLVIPKTLSVNAA 460
            ||||||::.:::.:.::||||..|..|::.|..::.:|:..|...:..||.::.|||.||:.||.
Mouse   406 HDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAG 470

  Fly   461 KDATDLVAKLRSYHNSSQTKPERSDLKWTGLDLIEGVVRDNKKAGVLEPAMSKIKSLKFATEAAI 525
            .:....|.:||:.|...:        |.||:::.:|.:.:..:..|::|.:..:.:|..|||...
Mouse   471 LNPISTVTELRNRHAQGE--------KTTGINVRKGGISNILEEMVVQPLLVSVSALTLATETVR 527

  Fly   526 TILRIDDMI 534
            :||:|||::
Mouse   528 SILKIDDVV 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT1NP_524450.2 TCP1_alpha 12..538 CDD:239451 170/529 (32%)
Cct4NP_033967.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29 1/1 (100%)
TCP1_delta 25..538 CDD:239454 170/529 (32%)
Cpn60_TCP1 44..539 CDD:278544 164/512 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60896
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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