DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pfdn5 and GIM5

DIOPT Version :9

Sequence 1:NP_001163688.1 Gene:Pfdn5 / 42647 FlyBaseID:FBgn0038976 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_013616.1 Gene:GIM5 / 854879 SGDID:S000004559 Length:163 Species:Saccharomyces cerevisiae


Alignment Length:162 Identity:57/162 - (35%)
Similarity:104/162 - (64%) Gaps:9/162 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SEMIDLTKLSPEQLIQIKQEFEQEITNVQDSLSTLHGCQAKYAGSKEALGTF-QPNWENRQILVP 74
            |:.||||||:||||..:||:|:||:.:...||..|...:.|:....:.:.|. |...|.:::|||
Yeast     3 SQKIDLTKLNPEQLNAVKQQFDQELQHFTQSLQALTMAKGKFTECIDDIKTVSQAGNEGQKLLVP 67

  Fly    75 LTSSMYVPGRVKDLNRFVIDIGTGYYIEKDLEGSKDYFKRRVEYVQEQIEKIEKIHLQKTRFYNS 139
            .::|:|:||::.|..:|::|||||||:||..|.:..:::::|:.:.::..:|:.|..:||::..|
Yeast    68 ASASLYIPGKIVDNKKFMVDIGTGYYVEKSAEAAIAFYQKKVDKLNKESVQIQDIIKEKTQYSLS 132

  Fly   140 VMSVLEMKQA------AAAKLQSQQQSQPAVT 165
            :.:  :::||      |.:|.|.|||.:.:.|
Yeast   133 IEA--QIRQAAIRQHEAMSKQQQQQQKKESST 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pfdn5NP_001163688.1 Prefoldin_alpha 21..149 CDD:238327 41/128 (32%)
GIM5NP_013616.1 GIM5 6..149 CDD:224644 50/144 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346337
Domainoid 1 1.000 72 1.000 Domainoid score I2204
eggNOG 1 0.900 - - E1_COG1730
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1972
Inparanoid 1 1.050 107 1.000 Inparanoid score I1404
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54008
OrthoFinder 1 1.000 - - FOG0005548
OrthoInspector 1 1.000 - - oto99367
orthoMCL 1 0.900 - - OOG6_101532
Panther 1 1.100 - - LDO PTHR12674
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R908
SonicParanoid 1 1.000 - - X3967
TreeFam 1 0.960 - -
1514.790

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