DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pfdn5 and Pfdn5

DIOPT Version :10

Sequence 1:NP_651053.1 Gene:Pfdn5 / 42647 FlyBaseID:FBgn0038976 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_001100264.2 Gene:Pfdn5 / 300257 RGDID:1311436 Length:154 Species:Rattus norvegicus


Alignment Length:153 Identity:54/153 - (35%)
Similarity:96/153 - (62%) Gaps:0/153 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SEMIDLTKLSPEQLIQIKQEFEQEITNVQDSLSTLHGCQAKYAGSKEALGTFQPNWENRQILVPL 75
            ::.|::|:|:..||..:|.:.:||:..:..|::.|...|.||..:|:.|.....:.|.:::||||
  Rat     2 AQSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPL 66

  Fly    76 TSSMYVPGRVKDLNRFVIDIGTGYYIEKDLEGSKDYFKRRVEYVQEQIEKIEKIHLQKTRFYNSV 140
            ||||||||::.|:...:||:|||||:||..|.:||:|||:::::.:|:|||:....:|.....:|
  Rat    67 TSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEKHAMKQAV 131

  Fly   141 MSVLEMKQAAAAKLQSQQQSQPA 163
            :.::..|......|.:.|.:..|
  Rat   132 VEMMSQKIQQLTALGATQATAKA 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pfdn5NP_651053.1 Prefoldin_5 23..146 CDD:467473 47/122 (39%)
coiled coil 23..62 CDD:467473 12/38 (32%)
coiled coil 106..146 CDD:467473 12/39 (31%)
Pfdn5NP_001100264.2 Prefoldin_5 14..137 CDD:467473 47/122 (39%)
coiled coil 14..53 CDD:467473 12/38 (32%)
coiled coil 97..137 CDD:467473 12/39 (31%)

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