DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nrx-1 and SLIT2

DIOPT Version :9

Sequence 1:NP_001262840.1 Gene:Nrx-1 / 42646 FlyBaseID:FBgn0038975 Length:1847 Species:Drosophila melanogaster
Sequence 2:XP_005248268.1 Gene:SLIT2 / 9353 HGNCID:11086 Length:1533 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nrx-1NP_001262840.1 LamG 110..263 CDD:238058
EGF_CA 311..347 CDD:238011
Laminin_G_2 386..517 CDD:280389
LamG 555..716 CDD:238058
EGF 746..777 CDD:278437
Laminin_G_2 814..945 CDD:280389
LamG 988..1136 CDD:238058
EGF 1164..1195 CDD:278437
Laminin_G_2 1233..1356 CDD:280389
SLIT2XP_005248268.1 LRRNT 27..58 CDD:214470
leucine-rich repeat 38..56 CDD:275380
LRR_8 55..115 CDD:404697
leucine-rich repeat 57..80 CDD:275380
internalin_A 73..>434 CDD:380193
leucine-rich repeat 81..104 CDD:275380
leucine-rich repeat 105..128 CDD:275380
leucine-rich repeat 129..152 CDD:275380
leucine-rich repeat 153..176 CDD:275380
LRR_8 154..211 CDD:404697
leucine-rich repeat 177..200 CDD:275380
leucine-rich repeat 201..329 CDD:275380
LRR_8 307..364 CDD:404697
leucine-rich repeat 330..353 CDD:275380
leucine-rich repeat 354..374 CDD:275380
leucine-rich repeat 378..401 CDD:275380
leucine-rich repeat 402..423 CDD:275380
PCC 407..>470 CDD:188093
leucine-rich repeat 426..527 CDD:275380
LRRNT 509..539 CDD:214470
leucine-rich repeat 541..563 CDD:275380
internalin_A 561..>858 CDD:380193
leucine-rich repeat 564..587 CDD:275380
leucine-rich repeat 588..611 CDD:275380
leucine-rich repeat 612..635 CDD:275380
leucine-rich repeat 636..659 CDD:275380
leucine-rich repeat 660..751 CDD:275380
leucine-rich repeat 752..782 CDD:275380
LRR_8 782..841 CDD:404697
leucine-rich repeat 783..806 CDD:275380
leucine-rich repeat 807..830 CDD:275380
leucine-rich repeat 831..852 CDD:275380
PCC 836..>1017 CDD:188093
leucine-rich repeat 855..867 CDD:275378
EGF_CA 1002..1038 CDD:238011
EGF_CA 1042..1077 CDD:238011
EGF_CA 1080..1116 CDD:238011
hEGF 1134..1155 CDD:403759
LamG 1187..1320 CDD:214598
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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