DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nrx-1 and crb2a

DIOPT Version :9

Sequence 1:NP_001262840.1 Gene:Nrx-1 / 42646 FlyBaseID:FBgn0038975 Length:1847 Species:Drosophila melanogaster
Sequence 2:NP_001038764.1 Gene:crb2a / 723994 ZFINID:ZDB-GENE-060612-1 Length:1466 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nrx-1NP_001262840.1 LamG 110..263 CDD:238058
EGF_CA 311..347 CDD:238011
Laminin_G_2 386..517 CDD:280389
LamG 555..716 CDD:238058
EGF 746..777 CDD:278437
Laminin_G_2 814..945 CDD:280389
LamG 988..1136 CDD:238058
EGF 1164..1195 CDD:278437
Laminin_G_2 1233..1356 CDD:280389
crb2aNP_001038764.1 EGF_CA 32..69 CDD:238011
EGF_CA 97..133 CDD:238011
EGF_CA <144..172 CDD:238011
EGF_CA 174..210 CDD:238011
EGF_CA 212..248 CDD:238011
EGF_CA 251..286 CDD:238011
EGF_CA 288..325 CDD:238011
EGF_CA 327..363 CDD:238011
EGF_CA 365..416 CDD:238011
EGF_CA 419..455 CDD:238011
Laminin_G_2 580..714 CDD:280389
LamG 786..929 CDD:238058
EGF_CA <969..997 CDD:238011
LamG 1046..1168 CDD:238058
EGF_CA <1208..1237 CDD:238011
EGF_CA 1240..1273 CDD:238011
EGF_CA 1276..1312 CDD:238011
EGF_CA 1320..1353 CDD:238011
EGF_CA 1356..1391 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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