Sequence 1: | NP_001262840.1 | Gene: | Nrx-1 / 42646 | FlyBaseID: | FBgn0038975 | Length: | 1847 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001030158.1 | Gene: | lama1 / 569971 | ZFINID: | ZDB-GENE-060118-1 | Length: | 3075 | Species: | Danio rerio |
Alignment Length: | 1191 | Identity: | 265/1191 - (22%) |
---|---|---|---|
Similarity: | 463/1191 - (38%) | Gaps: | 229/1191 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 TARTRPSMDMDQQRNRNQAELRLLPAQRTSTSAFESPDLRFNKARRRRRSEQVPPVVVEYRRSYR 83
Fly 84 VLIVSALLVSLAASFVTLSAGFQLDGSQNSFYTFRKWYTGLN-GTLELEFKTEQPNGLVLYTDDG 147
Fly 148 GTYDFFELKLVEGALRLRYNLGGGAQIITV-GRELHDGHWHKVQVLRNDEQTSLIVDGVSQQRST 211
Fly 212 KGKEFQFGKFASNSD------VYVGGMPNWYSSKLALLALPSVIFEPRFRGAIRNLVYADQPGGS 270
Fly 271 TRRQEIKQQRDIKCGDVPCDHGELPARERPLRGVRGGNTTDACERNDPCQHGGICISTDSGPICE 335
Fly 336 CRNLEYDGQ-YCEKEKAPSEATFRGTQFLSYDLGQTGAEPIVSAQDAISFYFRTRQPNGLLFY-T 398
Fly 399 GHGT-DYLNLALRDGGVSLTMGLANGKQEMHIKPSKVRFDDHQWHKVTVHR-----RIQEISSIT 457
Fly 458 SFCRLVTVVDDVYTDHSHIAGKFTMLSSS---RVYVGGAVNPRALLGARVHTNFVGCLRKVEFSA 519
Fly 520 DTLNLNLIDLAKSGSKLIQVAGNLEYQCPSGDPQDPVTFTT--RESHLVLPPWETGKQSSISFKF 582
Fly 583 RTKEPNGIIVLATGSKQPRAKNPVLIAIELLNGHIYIHLDLGSGASKVRAS-RRRVDDGDWHDLI 646
Fly 647 LRRNGRDAKVSVD-GVWNDFRTPGDG-TILELDGHMYLGGVGPAYNSVSWPAAIWTATLRQGFVG 709
Fly 710 CLRDLVLSGKAIDIAAFARVQ----DSASVKPSCHVQANVCNGNPCLNGGTCLEGWNRPICDCSA 770
Fly 771 TL------YGGPTCGRELATL----AFNGSQHMTIWLGNGQGTKTQTEELVIRFKTSRPAGLLLL 825
Fly 826 TSAESNSPDRLEIALVAGRVRASVRLSDREKNLLAGQSVLNDNNWHTIRFSRRASNLRLQVDGAP 890
Fly 891 PVRGMLSETILGRHSTMEIR-SVHLGGLFHAEEEIQMTSTMPNFVGQMQGLVFNGQRYLDIVKSL 954
Fly 955 GPELSALPSATFKLTARFVNSPAGQPYHAATFRSKHSYVGLAMLKAYN---SISIDFRFKTVEPN 1016
Fly 1017 GLLVFNGGRRNDFVAVELVNGHIHYTFDLGDGPVTMRDKSRIHMNDNRWHQVSIRRPGPKTH--T 1079
Fly 1080 LTVDDSFEIISLTGNNMH-----LELAGILYIGGVFKDMYSKLPASISSRSGFEGCLASL----- 1134
Fly 1135 ---DLGDASPSLTSDAVVPSS 1152 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nrx-1 | NP_001262840.1 | LamG | 110..263 | CDD:238058 | 32/160 (20%) |
EGF_CA | 311..347 | CDD:238011 | 10/36 (28%) | ||
Laminin_G_2 | 386..517 | CDD:280389 | 38/140 (27%) | ||
LamG | 555..716 | CDD:238058 | 47/165 (28%) | ||
EGF | 746..777 | CDD:278437 | 7/36 (19%) | ||
Laminin_G_2 | 814..945 | CDD:280389 | 29/131 (22%) | ||
LamG | 988..1136 | CDD:238058 | 38/165 (23%) | ||
EGF | 1164..1195 | CDD:278437 | |||
Laminin_G_2 | 1233..1356 | CDD:280389 | |||
lama1 | NP_001030158.1 | LamNT | 25..275 | CDD:214532 | |
EGF_Lam | 277..324 | CDD:238012 | |||
EGF_Lam | <364..390 | CDD:238012 | |||
Laminin_EGF | 404..463 | CDD:278482 | |||
Laminin_EGF | 461..506 | CDD:278482 | |||
Laminin_B | 571..699 | CDD:278481 | |||
EGF_Lam | 744..792 | CDD:238012 | |||
Laminin_EGF | 809..849 | CDD:278482 | |||
EGF_Lam | 851..903 | CDD:238012 | |||
Laminin_EGF | 905..951 | CDD:278482 | |||
Laminin_EGF | 954..1001 | CDD:278482 | |||
EGF_Lam | 1000..1045 | CDD:238012 | |||
Laminin_EGF | 1047..1095 | CDD:278482 | |||
Laminin_EGF | 1093..1149 | CDD:278482 | |||
Laminin_B | 1221..1346 | CDD:278481 | |||
EGF_Lam | <1365..1385 | CDD:238012 | |||
Laminin_EGF | 1407..1453 | CDD:278482 | |||
Laminin_EGF | 1456..1509 | CDD:278482 | |||
Laminin_EGF | 1512..>1549 | CDD:278482 | |||
Laminin_I | 1580..1842 | CDD:283627 | |||
Baculo_PEP_C | 1581..1711 | CDD:282382 | |||
Laminin_II | 2015..2148 | CDD:283628 | 25/111 (23%) | ||
LamG | 2133..2281 | CDD:238058 | 37/188 (20%) | ||
LamG | 2310..2466 | CDD:238058 | 44/201 (22%) | ||
LamG | 2491..2641 | CDD:238058 | 45/159 (28%) | ||
Laminin_G_1 | 2750..2877 | CDD:278483 | 30/139 (22%) | ||
LamG | 2897..3048 | CDD:238058 | 41/167 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |