DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrx-1 and CG6974

DIOPT Version :9

Sequence 1:NP_001262840.1 Gene:Nrx-1 / 42646 FlyBaseID:FBgn0038975 Length:1847 Species:Drosophila melanogaster
Sequence 2:NP_650414.1 Gene:CG6974 / 41815 FlyBaseID:FBgn0038285 Length:251 Species:Drosophila melanogaster


Alignment Length:99 Identity:20/99 - (20%)
Similarity:35/99 - (35%) Gaps:40/99 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   885 QVDGAPPV----------------------------RGMLSETILGRHSTMEIRSVHLGGLFH-- 919
            :::||||.                            ..:|:|..|...:.::..::||.||||  
  Fly    95 EIEGAPPAGKRYVSFKKSPNMCGTRVGYQPLSFGPHEVVLNEKCLTMPAVIQHETLHLLGLFHEQ 159

  Fly   920 ----AEEEIQMT-STMP-----NFVGQMQGLVFN 943
                .:|.:|:. ..:|     .|:...|...||
  Fly   160 SRPDRDEYVQIDYDNIPRKYWSQFMAMDQTTTFN 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nrx-1NP_001262840.1 LamG 110..263 CDD:238058
EGF_CA 311..347 CDD:238011
Laminin_G_2 386..517 CDD:280389
LamG 555..716 CDD:238058
EGF 746..777 CDD:278437
Laminin_G_2 814..945 CDD:280389 20/99 (20%)
LamG 988..1136 CDD:238058
EGF 1164..1195 CDD:278437
Laminin_G_2 1233..1356 CDD:280389
CG6974NP_650414.1 Astacin 55..251 CDD:279708 20/99 (20%)
ZnMc_astacin_like 59..249 CDD:239807 20/99 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444950
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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