Sequence 1: | NP_001262840.1 | Gene: | Nrx-1 / 42646 | FlyBaseID: | FBgn0038975 | Length: | 1847 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009294934.1 | Gene: | lama5 / 321243 | ZFINID: | ZDB-GENE-030131-9823 | Length: | 3665 | Species: | Danio rerio |
Alignment Length: | 1160 | Identity: | 248/1160 - (21%) |
---|---|---|---|
Similarity: | 402/1160 - (34%) | Gaps: | 348/1160 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 YQDNYADAAMTARTRPSMDMDQQRNRNQAELRLLPAQRTSTSAFES--PDLRFNKARRRRRSEQV 71
Fly 72 PPVVVEYRRSYRVLIVSALLVSLAASFVTLS------AGFQLDGSQN----SFYTFRKWYTGL-N 125
Fly 126 GTLELEFKTEQPN-GLVLYTDD-GGTYDFFELKLVEGALRLRYNLGGGAQIITVGRELHDGHWHK 188
Fly 189 VQVLRNDE--QTSLIVDG-----VSQQRSTKGKEFQFGKFASNSDVYVGGMPNWYS--------- 237
Fly 238 ------SKLALLALPSVI-----FEPRF-------------RGA-----IRNLVYAD-------- 265
Fly 266 ---QPGGSTRRQEIKQ----------QRDIKCGDVPCDHGELPARERPLRGVRG------GNTT- 310
Fly 311 -------------------------------------------------DACERND----PCQHG 322
Fly 323 GI--C--ISTDSGPICECRNLEYDGQY--CEKEKA-PSEATFRGTQFLSYDLGQTGAEPIVSAQD 380
Fly 381 AISFY----FRTRQPNGLLFYTGHGTDYLNLALRDGGVSLTMGLANGKQEMHIKPSKVRFDDHQW 441
Fly 442 HKVTVHRRIQEISSITSFCRLVTVVDDVYT---DHSHIAGKFTMLSSSRVYVGGAVNPRALLGAR 503
Fly 504 VHTNFVGCL-----------------------RKVEFSADTLNLNLIDLAKSGSKLIQVAGNLEY 545
Fly 546 Q-----CPSGDPQ----DPVTFT-TRESHLVLP--PWETGKQSSISFKFRTKEPNGIIVLATGSK 598
Fly 599 QPRAKNPVLIAIELLNGHIYIHLDLGSGASKVRASRRRVDDGDWHDLILRRNGRDAKVSVDGVWN 663
Fly 664 DFRTPGDGTILELDGHMYLGGVGPAYNSVSWPAAIWTATLRQGFVGCLRDLVLSGKAIDIAAFAR 728
Fly 729 VQDSASVKPSCHVQANVCNGNPCLNGGTCLEGWNRPICDCSATLYGGPTCGRELATLAFNGSQHM 793
Fly 794 TI--WLGNGQGTKTQTEELVIRFKTSRPAGLLLLTSAESNSPDRLEIALVAGRVRA--------- 847
Fly 848 SVRLSDREKNLLAGQSVLNDNNWHTIRFSRRASNLRLQVD-----GAPPVRGMLSETILGRHSTM 907
Fly 908 EIRSVHLGGLFHAEEEIQMTSTMPNFVGQMQGLVFNGQ-----RYLDIVKSLGPE 957 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nrx-1 | NP_001262840.1 | LamG | 110..263 | CDD:238058 | 38/204 (19%) |
EGF_CA | 311..347 | CDD:238011 | 10/45 (22%) | ||
Laminin_G_2 | 386..517 | CDD:280389 | 37/156 (24%) | ||
LamG | 555..716 | CDD:238058 | 41/163 (25%) | ||
EGF | 746..777 | CDD:278437 | 3/30 (10%) | ||
Laminin_G_2 | 814..945 | CDD:280389 | 37/144 (26%) | ||
LamG | 988..1136 | CDD:238058 | |||
EGF | 1164..1195 | CDD:278437 | |||
Laminin_G_2 | 1233..1356 | CDD:280389 | |||
lama5 | XP_009294934.1 | Laminin_N | 51..290 | CDD:278484 | |
EGF_Lam | 291..339 | CDD:238012 | |||
EGF_Lam | 350..413 | CDD:238012 | |||
EGF_Lam | 421..463 | CDD:214543 | |||
EGF_Lam | 482..529 | CDD:214543 | |||
Laminin_EGF | 529..577 | CDD:278482 | |||
Laminin_EGF | 575..622 | CDD:278482 | |||
Laminin_EGF | 620..667 | CDD:278482 | |||
EGF_Lam | 664..711 | CDD:238012 | |||
Laminin_EGF | 713..759 | CDD:278482 | |||
Laminin_EGF | 762..812 | CDD:278482 | |||
EGF_Lam | 815..858 | CDD:238012 | |||
Laminin_EGF | 1421..1469 | CDD:278482 | |||
Laminin_EGF | 1511..1561 | CDD:278482 | |||
Laminin_EGF | 1559..1607 | CDD:278482 | |||
Laminin_B | 1672..1796 | CDD:278481 | |||
EGF_Lam | 1842..1881 | CDD:238012 | |||
Laminin_EGF | 1894..1947 | CDD:278482 | |||
EGF_Lam | 1949..2002 | CDD:238012 | |||
Laminin_EGF | 2004..2048 | CDD:278482 | |||
Laminin_EGF | 2051..2099 | CDD:278482 | |||
Laminin_EGF | 2099..>2128 | CDD:278482 | |||
mycoplas_twoTM | 2158..>2351 | CDD:275320 | |||
Laminin_I | 2171..2429 | CDD:283627 | |||
COG1340 | 2319..2558 | CDD:224259 | |||
BAR | 2383..2637 | CDD:299863 | |||
Laminin_II | 2611..2741 | CDD:283628 | 27/120 (23%) | ||
LamG | 2757..2896 | CDD:214598 | 28/138 (20%) | ||
LamG | 2932..3075 | CDD:238058 | 25/146 (17%) | ||
LamG | 3110..3249 | CDD:238058 | 43/168 (26%) | ||
LamG | 3320..3466 | CDD:238058 | 41/162 (25%) | ||
LamG | 3490..3642 | CDD:238058 | 48/204 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |