Sequence 1: | NP_001262840.1 | Gene: | Nrx-1 / 42646 | FlyBaseID: | FBgn0038975 | Length: | 1847 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017454265.2 | Gene: | Cntnap5c / 297846 | RGDID: | 1566343 | Length: | 1306 | Species: | Rattus norvegicus |
Alignment Length: | 1186 | Identity: | 270/1186 - (22%) |
---|---|---|---|
Similarity: | 472/1186 - (39%) | Gaps: | 277/1186 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 357 FRGTQFLSYDLGQTGAEPIVSAQDAISFYFRTRQPNGLLFY-TGHGTDYLNLALRDGGVSLTMGL 420
Fly 421 ANGKQEMH-IKPSKV---RFDDHQWHKVTVHRRIQEISSITSFCRLVTVVDDVYTDHSHIAGKFT 481
Fly 482 MLSSSRVYVGGAVNPRALLGARVHTNFVGCLRKVEFSADTLNLNLIDLAKSGSKLIQVAGNLEYQ 546
Fly 547 CPSGDPQ-DPVTF-TTRESHLVLPPWETGKQSSISFKFRTKEPNGIIV---LATGSKQPRAKNPV 606
Fly 607 LIAIELLNGHIYIHLDLGSGASKVRASRRR---------VDDGDWHDLILRRNGRDAKVSVDGVW 662
Fly 663 NDFRTPG-DGTILEL-DGHMYLGGVGP-------AYNSVSWPAAIWTATLRQGFVGCLRDLVLSG 718
Fly 719 KAIDIAA--------FARVQ-DSASVKPSCHVQANVCNGNPCLNGGTCLEGWNRPICDCSATLYG 774
Fly 775 GPTCGRELATLAFNGSQHMTIWLGNGQGTKTQTEELVIRFKTSRPAGLLLLTSAESN-------- 831
Fly 832 ---SPDRLEIALVAGRVRAS-VRLSDREK---------NLLAGQSVLNDNNWH---TIRFSRRAS 880
Fly 881 NLRLQVDGAP-----------------PVRGMLSETILGRHSTMEIRS-----VHLG------GL 917
Fly 918 FHAEEEIQMTSTMPNFVGQMQGLVFNGQRYLDIVKSLGPELSALPSATFKLTARFVNSPAGQPYH 982
Fly 983 AATFRSKHSYVGLAMLKAYNSISIDFRFKTVEPNGLLVFNGGRRNDFVAVELVN-GHIHYTFDLG 1046
Fly 1047 DGPVTMRDKSRIHMNDNRWHQVSIRRPGPKTHTLTVDDSFEIISLTGNNMH--LELAGILYIGGV 1109
Fly 1110 FKDMYSKLPASISSRSGFEGCLASLDLGDASPSLTSDAVVPSSLVVSGCEGPTKCSQNACANRGN 1174
Fly 1175 CVQQWNAYACECDMTSYTGPTCYDE-SIAYEFGNNKGMVQYTFPE------NAQ-------ADT- 1224
Fly 1225 -EEDNIALGFITTRPDAVLLRVESATTQDYMELEIV-EGNIFMVYNIGSVDLPLGEIGTK-VNDN 1286
Fly 1287 AYHVVRFQRKGGNATLQLDDYNVQALTPQSHHSTVFNTMSNVQVG------------GKFSRNGR 1339
Fly 1340 NRIERPFAGVIAGLSVNKLRILDLAVERD--PHITIRG-------------DVQLVTGV---LD- 1385
Fly 1386 ---RNDLQRMQQTLNS 1398 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nrx-1 | NP_001262840.1 | LamG | 110..263 | CDD:238058 | |
EGF_CA | 311..347 | CDD:238011 | |||
Laminin_G_2 | 386..517 | CDD:280389 | 36/135 (27%) | ||
LamG | 555..716 | CDD:238058 | 43/182 (24%) | ||
EGF | 746..777 | CDD:278437 | 13/30 (43%) | ||
Laminin_G_2 | 814..945 | CDD:280389 | 27/182 (15%) | ||
LamG | 988..1136 | CDD:238058 | 45/150 (30%) | ||
EGF | 1164..1195 | CDD:278437 | 9/30 (30%) | ||
Laminin_G_2 | 1233..1356 | CDD:280389 | 22/136 (16%) | ||
Cntnap5c | XP_017454265.2 | FA58C | <63..173 | CDD:238014 | |
Laminin_G_2 | 209..338 | CDD:396680 | 36/142 (25%) | ||
Laminin_G_2 | 396..522 | CDD:396680 | 32/157 (20%) | ||
EGF | 551..582 | CDD:394967 | 13/30 (43%) | ||
LamG | 793..937 | CDD:238058 | 47/156 (30%) | ||
EGF | 961..>985 | CDD:394967 | 7/23 (30%) | ||
Laminin_G_2 | 1045..1173 | CDD:396680 | 23/138 (17%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |