DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrx-1 and GAS6

DIOPT Version :9

Sequence 1:NP_001262840.1 Gene:Nrx-1 / 42646 FlyBaseID:FBgn0038975 Length:1847 Species:Drosophila melanogaster
Sequence 2:NP_000811.1 Gene:GAS6 / 2621 HGNCID:4168 Length:678 Species:Homo sapiens


Alignment Length:541 Identity:116/541 - (21%)
Similarity:193/541 - (35%) Gaps:134/541 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 QEIKQQRDIK-CGDVPCDHGELPARERPL--RGVRGGNTTDACERNDPCQHG---GICISTDSGP 332
            |:|.:..|.: ||:..|.:  ||.....|  .|....:...||...|.|..|   .:|:::....
Human   196 QDIDECADSEACGEARCKN--LPGSYSCLCDEGFAYSSQEKACRDVDECLQGRCEQVCVNSPGSY 258

  Fly   333 ICEC-----RNLEYDGQYCEK-------EKAPS-EATFRGTQFLSYDLGQTGAEPIVSAQDAISF 384
            .|.|     ..|..|...||.       ..|.| ::.:.|..|....:.:...:.:...:....|
Human   259 TCHCDGRGGLKLSQDMDTCEDILPCVPFSVAKSVKSLYLGRMFSGTPVIRLRFKRLQPTRLVAEF 323

  Fly   385 YFRTRQPNGLLFYTGHGTD--YLNLALRDGGVSLTMGLANGKQEMHIKPSKVRFDDHQWHKVTVH 447
            .|||..|.|:|.:.|...|  ::.||||.|.:.|.:.. ||..  .:..|....:...|..::| 
Human   324 DFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLRY-NGVG--RVTSSGPVINHGMWQTISV- 384

  Fly   448 RRIQEISSITSFCRLVTVVDDVYTDHSHIAGKFTM----LSSSRVYVGG----------AVNPRA 498
               :|::.     .||..|:........:||....    |....:.|||          .:||| 
Human   385 ---EELAR-----NLVIKVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPR- 440

  Fly   499 LLGARVHTNFVGCLRKVEF-------SADTLNLN----LIDLAKSGSKLIQVAG----NLEYQCP 548
                     ..||:|...:       ..:|:.:|    ...:.:.|| ....:|    :|:|.  
Human   441 ---------LDGCMRSWNWLNGEDTTIQETVKVNTRMQCFSVTERGS-FYPGSGFAFYSLDYM-- 493

  Fly   549 SGDPQDPVTFTTRESHLVL---PPWETGKQSSISFKFRTKEPNGIIVLATGSKQPRAKNPVLIAI 610
             ..|.|..|.:|.|..:|.   |..:||...::........|..:.::...|.:...|..|::|:
Human   494 -RTPLDVGTESTWEVEVVAHIRPAADTGVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVVLAV 557

  Fly   611 ELLNGHIYIHLDLGSGASKVRASRRRVDDGDWHDLILRRNGRDAKVSVDGVWNDFRTPGDGTI-- 673
            |    |..:.|           ...:|.||..|.:.:.....:|.:.|||      |.|...:  
Human   558 E----HTALAL-----------MEIKVCDGQEHVVTVSLRDGEATLEVDG------TRGQSEVSA 601

  Fly   674 -------LELDGHM------YLGGVGPAYNSVSWPAAIWTATLRQGFVGCLRDLVLSGKAIDIAA 725
                   ..|:.|:      :.||: |.....|.|.   ||..|    ||: .|.::.:.:|:  
Human   602 AQLQERLAVLERHLRSPVLTFAGGL-PDVPVTSAPV---TAFYR----GCM-TLEVNRRLLDL-- 655

  Fly   726 FARVQDSASVKPSCHVQANVC 746
                 |.|:.|.| .:.|:.|
Human   656 -----DEAAYKHS-DITAHSC 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nrx-1NP_001262840.1 LamG 110..263 CDD:238058
EGF_CA 311..347 CDD:238011 10/43 (23%)
Laminin_G_2 386..517 CDD:280389 35/146 (24%)
LamG 555..716 CDD:238058 38/178 (21%)
EGF 746..777 CDD:278437 1/1 (100%)
Laminin_G_2 814..945 CDD:280389
LamG 988..1136 CDD:238058
EGF 1164..1195 CDD:278437
Laminin_G_2 1233..1356 CDD:280389
GAS6NP_000811.1 Gla 53..92 CDD:306960
EGF_CA 118..153 CDD:238011
FXa_inhibition 160..195 CDD:317114
EGF_CA 197..>227 CDD:214542 8/31 (26%)
vWFA <232..273 CDD:320736 9/40 (23%)
LamG 298..450 CDD:238058 38/173 (22%)
Laminin_G_2 513..651 CDD:308045 34/167 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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