DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrx-1 and hmr-1

DIOPT Version :9

Sequence 1:NP_001262840.1 Gene:Nrx-1 / 42646 FlyBaseID:FBgn0038975 Length:1847 Species:Drosophila melanogaster
Sequence 2:NP_001021650.1 Gene:hmr-1 / 173007 WormBaseID:WBGene00001980 Length:2920 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nrx-1NP_001262840.1 LamG 110..263 CDD:238058
EGF_CA 311..347 CDD:238011
Laminin_G_2 386..517 CDD:280389
LamG 555..716 CDD:238058
EGF 746..777 CDD:278437
Laminin_G_2 814..945 CDD:280389
LamG 988..1136 CDD:238058
EGF 1164..1195 CDD:278437
Laminin_G_2 1233..1356 CDD:280389
hmr-1NP_001021650.1 Cadherin_repeat 431..521 CDD:206637
Cadherin_repeat 534..638 CDD:206637
Cadherin_repeat 647..742 CDD:206637
Cadherin_repeat 752..861 CDD:206637
Cadherin_repeat 875..975 CDD:206637
Cadherin_repeat 983..1085 CDD:206637
Cadherin_repeat 1103..1206 CDD:206637
Cadherin_repeat 1216..1331 CDD:206637
Cadherin_repeat 1340..1432 CDD:206637
Cadherin_repeat 1443..1542 CDD:206637
Cadherin_repeat 1553..1657 CDD:206637
Cadherin_repeat 1666..1768 CDD:206637
Cadherin_repeat 1779..1868 CDD:206637
EGF_CA 2250..2283 CDD:238011
LamG 2286..2459 CDD:238058
LamG 2533..2679 CDD:304605
Cadherin_C 2812..>2919 CDD:279398
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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