DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrx-1 and LAMC3

DIOPT Version :9

Sequence 1:NP_001262840.1 Gene:Nrx-1 / 42646 FlyBaseID:FBgn0038975 Length:1847 Species:Drosophila melanogaster
Sequence 2:XP_011516423.1 Gene:LAMC3 / 10319 HGNCID:6494 Length:1581 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nrx-1NP_001262840.1 LamG 110..263 CDD:238058
EGF_CA 311..347 CDD:238011
Laminin_G_2 386..517 CDD:280389
LamG 555..716 CDD:238058
EGF 746..777 CDD:278437
Laminin_G_2 814..945 CDD:280389
LamG 988..1136 CDD:238058
EGF 1164..1195 CDD:278437
Laminin_G_2 1233..1356 CDD:280389
LAMC3XP_011516423.1 Laminin_N 44..269 CDD:278484
EGF_Lam 270..317 CDD:238012
Laminin_EGF 327..383 CDD:278482
EGF_Lam 382..428 CDD:238012
Laminin_EGF 430..477 CDD:278482
Laminin_B 541..662 CDD:278481
EGF_Lam 706..753 CDD:238012
EGF_Lam 754..802 CDD:238012
Laminin_EGF 810..857 CDD:278482
EGF_Lam 865..915 CDD:238012
Laminin_EGF 917..965 CDD:278482
EGF_Lam 964..1011 CDD:238012
PspA_IM30 1191..1426 CDD:281941
ATP-synt_B <1360..1453 CDD:304375
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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