DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrx-1 and si:dkey-22o22.2

DIOPT Version :9

Sequence 1:NP_001262840.1 Gene:Nrx-1 / 42646 FlyBaseID:FBgn0038975 Length:1847 Species:Drosophila melanogaster
Sequence 2:XP_001921123.3 Gene:si:dkey-22o22.2 / 100149950 ZFINID:ZDB-GENE-100922-84 Length:2780 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nrx-1NP_001262840.1 LamG 110..263 CDD:238058
EGF_CA 311..347 CDD:238011
Laminin_G_2 386..517 CDD:280389
LamG 555..716 CDD:238058
EGF 746..777 CDD:278437
Laminin_G_2 814..945 CDD:280389
LamG 988..1136 CDD:238058
EGF 1164..1195 CDD:278437
Laminin_G_2 1233..1356 CDD:280389
si:dkey-22o22.2XP_001921123.3 Cadherin_repeat 257..360 CDD:206637
Cadherin_repeat 355..447 CDD:206637
Cadherin_repeat 461..549 CDD:206637
Cadherin_repeat 558..657 CDD:206637
Cadherin_repeat 668..766 CDD:206637
Cadherin_repeat 775..863 CDD:206637
Cadherin_repeat 874..978 CDD:206637
Cadherin_repeat 986..1093 CDD:206637
Cadherin_repeat 1101..1194 CDD:206637
Cadherin_repeat 1203..1302 CDD:206637
Cadherin_repeat 1317..1416 CDD:206637
Cadherin_repeat 1424..1524 CDD:206637
Cadherin_repeat 1533..1630 CDD:206637
Cadherin_repeat 1637..1745 CDD:206637
Cadherin_repeat 1756..1836 CDD:206637
EGF_CA 2003..2038 CDD:238011
LamG 2062..2223 CDD:214598
EGF_CA 2247..2281 CDD:238011
Laminin_G_2 2315..2438 CDD:280389
EGF_CA 2512..2544 CDD:238011
Cadherin_C 2602..2758 CDD:279398
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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