DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pebp1 and MRPL35

DIOPT Version :10

Sequence 1:NP_651051.1 Gene:Pebp1 / 42644 FlyBaseID:FBgn0038973 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_010608.1 Gene:MRPL35 / 851921 SGDID:S000002730 Length:367 Species:Saccharomyces cerevisiae


Alignment Length:197 Identity:46/197 - (23%)
Similarity:85/197 - (43%) Gaps:27/197 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDTAGIIPDII-DVKPASKATITYP--SGVQ--VELGKELTPTQVKDQPTVVFDAE-------PN 53
            ::|...|||.: .:.|.::..|.:|  :||.  :|.|:.|:......:|  :|..:       ..
Yeast   159 LETLAAIPDTLPTLVPRAEVNIKFPFSTGVNKWIEPGEFLSSNVTSMRP--IFKIQEYELVNVEK 221

  Fly    54 SLYTILLVDPDAPSREDPKFRELLHWLVIN---------IPGNKVSEGQTIAEYIGAGPREGTGL 109
            .|||:|:|:||.|...:..|:..|.:.::|         |...|......||:|:...|.:..|.
Yeast   222 QLYTVLIVNPDVPDLSNDSFKTALCYGLVNINLTYNDNLIDPRKFHSSNIIADYLPPVPEKNAGK 286

  Fly   110 HRYVFLVFKQ---NDKITTEKFVSKTSRTGRINVKARDYIQKYSFGGPVAGNFFQAQYDDYVKTL 171
            .|:|..||:|   .||..............|.:...|.:.:||:... :..:.:::::|..|..:
Yeast   287 QRFVVWVFRQPLIEDKQGPNMLEIDRKELSRDDFDIRQFTKKYNLTA-IGAHIWRSEWDAKVAAV 350

  Fly   172 IE 173
            .|
Yeast   351 RE 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pebp1NP_651051.1 PEBP_euk 20..162 CDD:176644 38/164 (23%)
MRPL35NP_010608.1 PEBP_euk 178..341 CDD:176644 38/165 (23%)

Return to query results.
Submit another query.