DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pebp1 and FT

DIOPT Version :10

Sequence 1:NP_651051.1 Gene:Pebp1 / 42644 FlyBaseID:FBgn0038973 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_001320342.1 Gene:FT / 842859 AraportID:AT1G65480 Length:219 Species:Arabidopsis thaliana


Alignment Length:163 Identity:54/163 - (33%)
Similarity:86/163 - (52%) Gaps:16/163 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IIPDIIDVKPASKA---TITYPSGVQVELGKELTPTQVKDQPTVVFDAEP-NSLYTILLVDPDAP 66
            ::.|::|  |.:::   .:||... :|..|.:|.|:||:::|.|....|. .:.||:::||||.|
plant    58 VVGDVLD--PFNRSITLKVTYGQR-EVTNGLDLRPSQVQNKPRVEIGGEDLRNFYTLVMVDPDVP 119

  Fly    67 SREDPKFRELLHWLVINIPGNK-VSEGQTIAEYIGAGPREGTGLHRYVFLVFKQNDKITTEKFVS 130
            |..:|..||.|||||.:||... .:.|..|..|  ..|....|:||.||::|:|..:.|.     
plant   120 SPSNPHLREYLHWLVTDIPATTGTTFGNEIVCY--ENPSPTAGIHRVVFILFRQLGRQTV----- 177

  Fly   131 KTSRTGRINVKARDYIQKYSFGGPVAGNFFQAQ 163
             .:...|.|...|::.:.|:.|.|||..|:..|
plant   178 -YAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQ 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pebp1NP_651051.1 PEBP_euk 20..162 CDD:176644 50/143 (35%)
FTNP_001320342.1 PLN00169 45..219 CDD:177765 54/163 (33%)

Return to query results.
Submit another query.