DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pebp1 and ATC

DIOPT Version :10

Sequence 1:NP_651051.1 Gene:Pebp1 / 42644 FlyBaseID:FBgn0038973 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_180324.1 Gene:ATC / 817302 AraportID:AT2G27550 Length:175 Species:Arabidopsis thaliana


Alignment Length:161 Identity:63/161 - (39%)
Similarity:86/161 - (53%) Gaps:10/161 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IIPDIID-VKPASKATITYPSGVQVELGKELTPTQVKDQPTV-VFDAEPNSLYTILLVDPDAPSR 68
            :|.|::| ...|.|.|:||.|..||..|.||.|:.|..:|.| |...:..|.:|:::.|||.|..
plant    14 VIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMRSFFTLVMTDPDVPGP 78

  Fly    69 EDPKFRELLHWLVINIPG-NKVSEGQTIAEYIGAGPREGTGLHRYVFLVFKQNDKITTEKFVSKT 132
            .||..||.|||:|.:||| ..||.|:.|..|  ..||...|:||:|:|:|||..:   ...||..
plant    79 SDPYLREHLHWIVTDIPGTTDVSFGKEIIGY--EMPRPNIGIHRFVYLLFKQTRR---GSVVSVP 138

  Fly   133 SRTGRINVKARDYIQKYSFGGPVAGNFFQAQ 163
            |...:.|  .|::..:...|.|||..||..|
plant   139 SYRDQFN--TREFAHENDLGLPVAAVFFNCQ 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pebp1NP_651051.1 PEBP_euk 20..162 CDD:176644 57/143 (40%)
ATCNP_180324.1 PEBP 7..175 CDD:469671 63/161 (39%)

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