DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pebp1 and CG7054

DIOPT Version :10

Sequence 1:NP_651051.1 Gene:Pebp1 / 42644 FlyBaseID:FBgn0038973 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_651050.1 Gene:CG7054 / 42643 FlyBaseID:FBgn0038972 Length:179 Species:Drosophila melanogaster


Alignment Length:175 Identity:87/175 - (49%)
Similarity:126/175 - (72%) Gaps:8/175 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IIPDIIDVKPASKATITYPSGVQVELGKELTPTQVKDQPTVVFDA--EPNSLYTILLVDPDAPSR 68
            |:||::|..||....:.|...::|:.|.|||||||||||.|.:..  ..::|.|:|:||||||:|
  Fly     4 IVPDVLDAVPAGTIKVIYGDDLEVKQGNELTPTQVKDQPIVSWSGLEGKSNLLTLLMVDPDAPTR 68

  Fly    69 EDPKFRELLHWLVINIPGN--KVSEGQTIAEYIGAGPREGTGLHRYVFLVFKQNDKITTEKFVSK 131
            :|||:||:|||.|:||||:  ..|.|.::|:|:|:||.:.||||||:||:::|.:||.....:|.
  Fly    69 QDPKYREILHWSVVNIPGSNENPSGGHSLADYVGSGPPKDTGLHRYIFLLYRQENKIEETPTISN 133

  Fly   132 TSRTGRINVKARDYIQKYSFGGPVAGNFFQAQYDDYV----KTLI 172
            |:||||:|..|||:..|:..|.|:|.|::||||||||    ||::
  Fly   134 TTRTGRLNFNARDFAAKHGLGEPIAANYYQAQYDDYVPIRNKTIV 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pebp1NP_651051.1 PEBP_euk 20..162 CDD:176644 71/145 (49%)
CG7054NP_651050.1 PEBP_euk 15..164 CDD:176644 71/148 (48%)

Return to query results.
Submit another query.