DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pebp1 and Mrpl38

DIOPT Version :10

Sequence 1:NP_651051.1 Gene:Pebp1 / 42644 FlyBaseID:FBgn0038973 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_001009369.2 Gene:Mrpl38 / 303685 RGDID:1311180 Length:380 Species:Rattus norvegicus


Alignment Length:165 Identity:58/165 - (35%)
Similarity:84/165 - (50%) Gaps:29/165 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ITYPSG----VQVELGKELTPTQVKDQPTVVFDAEPNSLYTIL-------LVDPDAPSREDPKFR 74
            :.|..|    :.|..|.|:|||:....|.|.::|:.:||:|:|       |::|||         
  Rat   175 VAYALGEEDLIPVYHGNEVTPTEASQAPEVTYEADKDSLWTLLFINLDGHLLEPDA--------- 230

  Fly    75 ELLHWLVINIPGNKVSEGQTIAEYIGAGPREGTGLHRYVFLVFKQNDKITTEKFVSKTSRTGRIN 139
            |.|||||.|||.|:|:|||....|:...|..|:|.||:.||:|||:..|   .|...|..:....
  Rat   231 EYLHWLVTNIPSNRVAEGQESCPYLPPFPARGSGFHRFAFLLFKQDKPI---NFSEDTRPSPCYQ 292

  Fly   140 VKAR-----DYIQKYSFGGPVAG-NFFQAQYDDYV 168
            :..|     |:.:|:......|| .|||.::||.|
  Rat   293 LAQRTFHTLDFYKKHQEAMTPAGLAFFQCRWDDSV 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pebp1NP_651051.1 PEBP_euk 20..162 CDD:176644 54/157 (34%)
Mrpl38NP_001009369.2 PEBP_euk 171..321 CDD:176644 54/157 (34%)

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