DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pebp1 and Pebp1

DIOPT Version :10

Sequence 1:NP_651051.1 Gene:Pebp1 / 42644 FlyBaseID:FBgn0038973 Length:176 Species:Drosophila melanogaster
Sequence 2:XP_063127302.1 Gene:Pebp1 / 29542 RGDID:62017 Length:214 Species:Rattus norvegicus


Alignment Length:197 Identity:52/197 - (26%)
Similarity:72/197 - (36%) Gaps:97/197 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 IDVKPASKATITYPSGVQV-ELGKELTPTQVKDQP-TVVFDA-EPNSLYTILLVDPDAPSREDPK 72
            :|..|.....:.| .||.| ||||.||||||.::| ::.:|. :|..|||::|.|||||||:|||
  Rat    17 VDEPPQHALRVDY-GGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPK 80

  Fly    73 F---------------------------------------------------------------- 73
            |                                                                
  Rat    81 FRPVGGKVGRGYHPDILNLVEVPAGQGCIDLPGLQLVCSAGETASAPGMGSLGVQPSCVLVLPSV 145

  Fly    74 -----------------------------RELLHWLVINIPGNKVSEGQTIAEYIGAGPREGTGL 109
                                         ||..|:||:|:.||.:|.|..::||:|:||.:.||.
  Rat   146 SSASCSPAVEDPRCTPPSFGAQSPCSLLCREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGK 210

  Fly   110 HR 111
            .|
  Rat   211 ER 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pebp1NP_651051.1 PEBP_euk 20..162 CDD:176644 50/188 (27%)
Pebp1XP_063127302.1 None

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