DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pebp1 and pebp4

DIOPT Version :10

Sequence 1:NP_651051.1 Gene:Pebp1 / 42644 FlyBaseID:FBgn0038973 Length:176 Species:Drosophila melanogaster
Sequence 2:XP_002932751.1 Gene:pebp4 / 100488878 XenbaseID:XB-GENE-941751 Length:202 Species:Xenopus tropicalis


Alignment Length:130 Identity:46/130 - (35%)
Similarity:72/130 - (55%) Gaps:9/130 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 QVKDQPTVVFD-AEPNSLYTILLVDPDAPSREDPKFRELLHWLVINIPGNKVSEGQ-----TIAE 97
            :|.|.|.:.:. |:|...|.:::||||||||.|||:|...||::.:|||.::..|:     .|:.
 Frog    71 KVWDYPLLRYSKAQPGLKYVLIMVDPDAPSRWDPKYRYWRHWVLTDIPGWQLLSGRDLTGNDISA 135

  Fly    98 YIGAGPREGTGLHRYVFLVFKQNDKITTEKFVSKTSRTGRINVKARDYIQKYSFGGPVAGNFFQA 162
            |....|..|||.|||.|.:::|...:.. .|:.:..|....::||  ::|:...|.|||...|.|
 Frog   136 YRRPSPPPGTGYHRYQFYLYEQPLWVIL-YFLPEEIRRSTWDLKA--FVQRNKLGEPVATTQFLA 197

  Fly   163  162
             Frog   198  197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pebp1NP_651051.1 PEBP_euk 20..162 CDD:176644 45/128 (35%)
pebp4XP_002932751.1 PEBP_euk 42..197 CDD:176644 45/128 (35%)

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