DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7054 and mrpl38

DIOPT Version :10

Sequence 1:NP_651050.1 Gene:CG7054 / 42643 FlyBaseID:FBgn0038972 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_998110.1 Gene:mrpl38 / 405881 ZFINID:ZDB-GENE-040426-2373 Length:345 Species:Danio rerio


Alignment Length:167 Identity:56/167 - (33%)
Similarity:81/167 - (48%) Gaps:19/167 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PAGTIKVIYGDD--LEVKQGNELTPTQVKDQPIVSWSGLEGKSNLLTLLMVDPDAPTRQDPKYRE 75
            |...:::.||||  ..|..||.|||:|.:..|.|.:...|  .:|.|||:..||.....:.  :|
Zfish   136 PRVMLRIGYGDDSSAAVHYGNHLTPSQAEQAPHVHYEAEE--DSLWTLLLTSPDEHLLDEE--QE 196

  Fly    76 ILHWSVVNIPGSNENPSGGHSLADYVGSGPPKDTGLHRYIFLLYRQE------NKIEETPTISNT 134
            .|||.|.||||  ...:.|..:..|:...|.:.|||||:||:|::|:      :.:...|..|..
Zfish   197 YLHWLVGNIPG--RAVASGDQICPYLCPFPARGTGLHRFIFILFKQDALVDFASDVRPVPCESLK 259

  Fly   135 TRTGRLNFNARDFAAKH-GLGEPIAANYYQAQYDDYV 170
            .|    :|...||..|| .|..|....::|.|:|..|
Zfish   260 QR----SFQTLDFYRKHQDLITPAGLAFFQCQWDQSV 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7054NP_651050.1 PEBP_euk 15..164 CDD:176644 51/157 (32%)
mrpl38NP_998110.1 PEBP_euk 138..286 CDD:176644 51/157 (32%)

Return to query results.
Submit another query.