DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7054 and Mrpl38

DIOPT Version :10

Sequence 1:NP_651050.1 Gene:CG7054 / 42643 FlyBaseID:FBgn0038972 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001009369.2 Gene:Mrpl38 / 303685 RGDID:1311180 Length:380 Species:Rattus norvegicus


Alignment Length:177 Identity:59/177 - (33%)
Similarity:82/177 - (46%) Gaps:35/177 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VPAGTIKVIYG----DDLEVKQGNELTPTQVKDQPIVSWSGLEGKSNLLTLL-------MVDPDA 65
            ||...:.|.|.    |.:.|..|||:|||:....|.|::..  .|.:|.|||       :::|||
  Rat   168 VPWVPLHVAYALGEEDLIPVYHGNEVTPTEASQAPEVTYEA--DKDSLWTLLFINLDGHLLEPDA 230

  Fly    66 PTRQDPKYREILHWSVVNIPGSNENPSGGHSLADYVGSGPPKDTGLHRYIFLLYRQENKI---EE 127
                     |.|||.|.||| ||....|..| ..|:...|.:.:|.||:.|||::|:..|   |:
  Rat   231 ---------EYLHWLVTNIP-SNRVAEGQES-CPYLPPFPARGSGFHRFAFLLFKQDKPINFSED 284

  Fly   128 T---PTISNTTRTGRLNFNARDFAAKHGLG-EPIAANYYQAQYDDYV 170
            |   |......||    |:..||..||... .|....::|.::||.|
  Rat   285 TRPSPCYQLAQRT----FHTLDFYKKHQEAMTPAGLAFFQCRWDDSV 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7054NP_651050.1 PEBP_euk 15..164 CDD:176644 53/166 (32%)
Mrpl38NP_001009369.2 PEBP_euk 171..321 CDD:176644 53/166 (32%)

Return to query results.
Submit another query.