DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-2mu and AP1M1

DIOPT Version :9

Sequence 1:NP_001163686.1 Gene:AP-2mu / 42642 FlyBaseID:FBgn0263351 Length:437 Species:Drosophila melanogaster
Sequence 2:NP_001123996.1 Gene:AP1M1 / 8907 HGNCID:13667 Length:435 Species:Homo sapiens


Alignment Length:446 Identity:174/446 - (39%)
Similarity:260/446 - (58%) Gaps:32/446 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQ-VRSPVTNIARTSFFHIKRANIWLAAV 68
            ::|.:.||:|||.|.||.|:..:.|:.|...::...:: :.||:.......|..||..|::|.|.
Human     6 VYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWIKHNNLYLVAT 70

  Fly    69 TKQNVNAAMVFEFLLKIIEVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNTDSGTLKTFI 133
            :|:|...::||.||.|:::|...||.::.||:|::|||:|||||||::||||||.|||..|:.:|
Human    71 SKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDFGYPQTTDSKILQEYI 135

  Fly   134 TQQGIKSATKEEQMQITSQVTGQIGWRREGIKYRRNELFLDVLEYVNLL------------MSPQ 186
            ||:|.|..|...:...|  ||..:.||.||||||:||:||||:|.||||            :|..
Human   136 TQEGHKL
ETGAPRPPAT--VTNAVSWRSEGIKYRKNEVFLDVIESVNLLGKYPGVGWLGHTVSAN 198

  Fly   187 GQVLSAHVAGKVVMKSYLSGMPECKFGINDKIVMESKGRGLSGNSEAETSRSGKPVVVIDDCQFH 251
            |.||.:.:.|.:.|:.:||||||.:.|:|||::.::.|||.|.:.|            ::|.:||
Human   199 GNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFDNTGRGKSKSVE------------LEDVKFH 251

  Fly   252 QCVKLSKFETEHSISFIPPDGEFELMRYRTTKDISLPFRVIPLVREVGRTKMEVKVVLKSNFKPS 316
            |||:||:||.:.:|||||||||||||.||....:.....:..::.:...:::|..:..||.||..
Human   252 QCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIEKHSHSRIEYMIKAKSQFKRR 316

  Fly   317 LLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKK 381
            .....:|:.||.|.:....:.....|..|:....:.|||.||...|.||..:.|...|...:.:.
Human   317 STANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAED 381

  Fly   382 KWTRPPISMNFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVVKWVRYIGRSGLYETR 436
            |..:||||:.||:| |..||.:|||||:.|.    |.:..:.|||||.::|.|:.|
Human   382 KEGKPPISVKFEIPYFTTSGIQVRYLKIIEK----SGYQALPWVRYITQNGDYQLR 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-2muNP_001163686.1 AP2_Mu_N 1..140 CDD:341440 57/135 (42%)
AP-2_Mu2_Cterm 166..436 CDD:271159 105/282 (37%)
AP1M1NP_001123996.1 AP1_Mu_N 4..142 CDD:341439 57/135 (42%)
AP-1_Mu1A_Cterm 153..434 CDD:271166 114/297 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D725236at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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