DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AP-2mu and APM2

DIOPT Version :10

Sequence 1:NP_651049.3 Gene:AP-2mu / 42642 FlyBaseID:FBgn0263351 Length:437 Species:Drosophila melanogaster
Sequence 2:NP_011844.1 Gene:APM2 / 856367 SGDID:S000001011 Length:605 Species:Saccharomyces cerevisiae


Alignment Length:627 Identity:141/627 - (22%)
Similarity:223/627 - (35%) Gaps:235/627 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIGGLFVYNHKGEVLISRVYRDDIGRNAV-DAFRVNVIHARQQVRSPVTNIARTSFFHIKRANIW 64
            |...||:.:...|.|:|:..|.....::| .:|:    ........|:.:.....|.|:||..:.
Yeast     1 MSSSLFILDENLEPLVSKNIRALPNLSSVLSSFK----QCYHDGSPPILSQNDWFFIHLKRDFLH 61

  Fly    65 LAAV----TKQNVNAAMVFEFLLKIIEVMQSYF--GKISEENIKNNFVLIYELLDEILDFGYPQN 123
            ..:|    .|.|::...:..||.:...::|.||  ..:::..|.:|.:|:.||:||.:|||..|.
Yeast    62 FVSVIHTTDKPNIDLMTILAFLEQFYHLLQKYFEIEVLTKNVILDNILLVLELIDECIDFGIVQV 126

  Fly   124 TDSGTLKTFI------------------------------------------------------- 133
            ||...:|.:|                                                       
Yeast   127 TDPSIIKDYIRVKVNVPRVTVDNEEWSPGEESSSSSGSDSDSEYSNTNKRKDKKKKRKKKKGTKG 191

  Fly   134 ----------------TQQGI-----------------KSATKEE----------QMQITSQVTG 155
                            ..:||                 |.|..:|          ...|...:..
Yeast   192 KSVGKSKLKSIMVNNKENRGINVVETVKETLRNKNDTGKEAANDELPNDGNDLYINGDIAKTIIM 256

  Fly   156 QIGWRREGIKYRRNELFLDVLEYVNLLMS-PQGQVLSAHVAGKVVMKSYLSGMPECKFGINDKIV 219
            .|.||.:||.|.:||.||||:|.|..||. .:|.:....:.|::|.:.||||||:.|..||.  :
Yeast   257 PISWRTKGIHYAKNEFFLDVIERVQYLMDFEKGVIRKNLIHGEIVCRCYLSGMPKLKISINK--I 319

  Fly   220 MESKGRGLSGNSEAETSRSGKPVVVIDDCQFHQCVKLSKFET--------------------EHS 264
            :....:.:|.:|                  |||||.|....|                    ...
Yeast   320 LNRDPQFMSNSS------------------FHQCVSLDSINTIEKDEEKNSDDDAGLQAATDARE 366

  Fly   265 ISFIPPDGEFELMRY---RTTKDISLPFRVIPLVR--------EVGRTKMEVKVVLKSNFKPSLL 318
            |.||||||||.|.:|   |..||       .|:||        ::.:.|:::...:::||||:..
Yeast   367 IEFIPPDGEFVLCQYELKRHVKD-------APMVRLKDFEIKPKLKKFKIQIVTKIQTNFKPTNS 424

  Fly   319 GQKIEVKIPTPLNTSGVQLICLK--------GKAKYKASENAIVWKIKRMAGMKE--TQLSA--- 370
            ..|:.|:||........::...|        ||..:..|::.::|:|:.|.|.:|  |..|:   
Yeast   425 TSKLNVRIPLTKVFQEYKIDLSKQIRFKANIGKVVFNLSDDFLLWEIQTMKGHREHSTNKSSQYN 489

  Fly   371 ----------------------EIELLETDTKKKWTRPP-------------------------- 387
                                  |.:.|:.:.|.....||                          
Yeast   490 SDEDDPNTCASMVAEFPLFNQEEYDRLQEEMKTSMNPPPLRTGPRLEELYRQVHDQQTSHVTPRD 554

  Fly   388 --ISMNFEVPFAP-SGFKVRYLKVFEPKLNYSDHDVVKWVRY 426
              ::::||:|:.. ||.||.||||.||:|.|..   ..||||
Yeast   555 KLVNIDFEIPYCTCSGLKVEYLKVEEPQLQYQS---FPWVRY 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-2muNP_651049.3 AP2_Mu_N 1..140 CDD:341440 39/233 (17%)
AP-2_Mu2_Cterm 166..436 CDD:271159 93/357 (26%)
APM2NP_011844.1 AP_Mu_N 3..138 CDD:341432 36/138 (26%)
AP-1_Mu1_Cterm 256..603 CDD:271158 98/368 (27%)

Return to query results.
Submit another query.