DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AP-2mu and ap1m2

DIOPT Version :10

Sequence 1:NP_651049.3 Gene:AP-2mu / 42642 FlyBaseID:FBgn0263351 Length:437 Species:Drosophila melanogaster
Sequence 2:NP_991277.2 Gene:ap1m2 / 403021 ZFINID:ZDB-GENE-041114-20 Length:424 Species:Danio rerio


Alignment Length:434 Identity:166/434 - (38%)
Similarity:266/434 - (61%) Gaps:20/434 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQ-VRSPVTNIARTSFFHIKRANIWLAAV 68
            :||.:.||:|||.|.|:.|:..:.:|.|...::...:. :.|||.:.....|..||..|::|.|.
Zfish     6 VFVLDLKGKVLICRNYKGDVDMSEIDHFFTLLMQQEEDGLISPVMSHGNVHFLWIKHNNLYLVAT 70

  Fly    69 TKQNVNAAMVFEFLLKIIEVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNTDSGTLKTFI 133
            |.:|.||::|:.||.|::||...||.::.||:|::|||::||||||::|||:||.|||..|:.:|
Zfish    71 TNKNSNASLVYAFLYKLVEVFTEYFKELEEESIQDNFVVVYELLDELMDFGFPQTTDSKILQEYI 135

  Fly   134 TQQGIKSATKEEQMQITSQVTGQIGWRREGIKYRRNELFLDVLEYVNLLMSPQGQVLSAHVAGKV 198
            ||||.|....:.::..|  ||..:.||.|||:|::||:|:||:|.:|:|::..|.|:|:.:.|.:
Zfish   136 TQQGQKLEVAKTKVPTT--VTNAVSWRSEGIRYKKNEVFIDVIESINVLVNANGSVMSSDIVGCI 198

  Fly   199 VMKSYLSGMPECKFGINDKIVMESKGRGLSGNSEAETSRSGKPVVVIDDCQFHQCVKLSKFETEH 263
            .:|:.||||||.:.|:||:::.     .|:|..:.:|       ||::|.:|||||:||:||::.
Zfish   199 RLKTMLSGMPELRLGLNDRVLF-----ALTGRDKGKT-------VVMEDVKFHQCVRLSRFESDR 251

  Fly   264 SISFIPPDGEFELMRYRTTKDISLPFRVIPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPT 328
            :|||||||||.|||.||....:.....:..::.:...:::|:.|..|..||...:...:|:::|.
Zfish   252 TISFIPPDGESELMSYRINTHVKPLIWIESVIEKFSHSRVEIMVKAKGQFKKQSVANNVEIRVPV 316

  Fly   329 PLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMNFE 393
            |.:....:.....|.|||...:|.:||.||...|.||..:.|...|...:..:...:|||::.||
Zfish   317 PSDADSPKFKTSTGHAKYVPEKNLVVWSIKSFPGGKEFLMRAHFGLPSVENDELEGKPPITVKFE 381

  Fly   394 VP-FAPSGFKVRYLKVFEPKLNYSDHDVVKWVRYIGRSGLYETR 436
            :| |..||.:|||:|:.|.    |.:..:.|||||.:||.|:.|
Zfish   382 IPYFTVSGIQVRYMKIIEK----SGYQALPWVRYITQSGDYQLR 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-2muNP_651049.3 AP2_Mu_N 1..140 CDD:341440 59/135 (44%)
AP-2_Mu2_Cterm 166..436 CDD:271159 97/270 (36%)
ap1m2NP_991277.2 None

Return to query results.
Submit another query.